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information-artifact-ontology - issue #141

clean up metadata of 'has curation status'


Posted on May 17, 2013 by Quick Ox

AnnotationProperty: has curation status http://purl.obolibrary.org/obo/IAO_0000114

with definition source: OBI_0000281 http://purl.obolibrary.org/obo/OBI_0000281 is the IRI of class 'intraperitoneal injection'.

The annotation should be removed in IAO.

Comment #1

Posted on May 22, 2013 by Massive Bear

Hm - looking at old releases, it seems until https://obi.svn.sourceforge.net/svnroot/obi/releases/2008-11-28/merged/OBI.owl OBI_0000281 was has curation status. See for example the release before that, https://obi.svn.sourceforge.net/svnroot/obi/releases/2008-09-26/merged/OBI.owl

I guess there was an issue with the ID assignment - maybe the script looking for the first "free ID"?

I would suggest to update the annotation to say "OBI group". Would that work?

Comment #2

Posted on May 22, 2013 by Quick Ox

It could be. However, when OBI make the first beta release, if I remember correctly, OBI decided to remove all the terms completely if they were deprecated before that time.

Comment #3

Posted on May 22, 2013 by Massive Bear

Repaired in http://code.google.com/p/obo-ontology-metadata/ Will be propagated at next release.

Status: Done