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jmzquantmlReleaseNotes  
Summary of changes in the jmzquantml API.
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Updated Jul 11, 2014 by ukq...@gmail.com

Changelog

  • Current version 1.0.0-1.0.5
  • Previous version 1.0.0-1.0.4-alpha

jmzquantml version 1.0.0-1.0.5 -- (7, July 2014)

  • implemented all the *RefResolver classes
  • adjusted to Java 1.7


jmzquantml version 1.0.0-1.0.4-alpha -- (2, May 2014)

  • fixed the bug that xmlExtractor.detectFileEncoding returns null on files that don't have XML header
  • added missing setIdRefs methods in EvidenceRef


jmzquantml version 1.0.0-1.0.3 -- (31, October 2013)

  • added java documentations
  • resolved assay_refs in EvidenceRef
  • fixed potential bug of duplicating Assay_refs in StudyVariableRefResolver, ProteinRefResolver and AssayRefResolver


jmzquantml version 1.0.0-1.0.2 -- (9, May 2013)

  • fixed the bugs of getting null list from some element classes


jmzquantml version 1.0.0-1.0.1 -- (7, May 2013)

  • added various unmarshallng and marshalling functions
  • added reference resolvers


jmzquantml version 1.0.0-1.0.0 -- (15, February 2013)

  • adapted to mzQuantML version 1.0


jmzquantml version 1.0.0-rc3-1.0.5 -- (30, November 2012)

  • adapted to latest schema changes:
    • added a new <RatioQuantLayer> with the DataType element
    • added a new optional rawFile_ref to <Feature>

jmzquantml version 1.0.0-rc3-1.0.4.1 -- (29, November 2012)
  • fixed the bug of wrong <ProteinGroup> class


jmzquantml version 1.0.0-rc3-1.0.4 -- (28, November 2012)

  • adapt to latest schema change which introduces <ProteinRef> element under <ProteinGroup>


jmzquantml version 1.0.0-rc3-1.0.3 -- (22, November 2012)

  • adapt to latest schema changes:
    • the root mzQuantML element now has a mandatory id and an optional name
    • pre order Person before <Organization> in <AuditCollection>
    • add complete definitions to elements

jmzquantml version 1.0.0-rc3-1.0.2 -- (8, November 2012)

  • be able to unmarshal <ParamList> and <ParamGroup>

jmzquantml version 1.0.0-rc3-1.0.1 -- (2, November 2012)

  • fix the bug of wrong namespace in marshall function

jmzquantml version 1.0.0-rc3-1.0.0 -- (1, November 2012)

  • update this (README.txt) document
  • this version comply to mzQuantML_1_0_0-rc3.xsd (31, October 2012)

jmzquantml version 1.0.0-rc2-1.0.1 -- (23, October 2012)


jmzquantml version 1.0.0-rc2-1.0.0 -- (4, July 2012)

  • move to Maven 3.0.4
  • add README.txt, LICENCE.txt
  • add bindings.xjb and mzQuantML_1_0_0-rc2.xsd (11, June 2012) for customization to JAXB bindings
  • change package name to "uk.ac.liv.jmzqml.model.mzqml"
  • change element classes name by removing 'Type' suffixes

jmzquantml Version 1.0.0-rc2 - (7, June 2012)

  • comply to mQuantML_1_0_0-rc2.xsd (7, June 2012)
  • provide basic marshaller and unmarshaller classes

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