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InterProScan 5

Note 24/08/15:

Google code (and therefore the InterProScan 5 files and documentation hosted on it) will be read-only from 25th August 2015: https://code.google.com/p/support/wiki/ReadOnlyTransition

The latest documentation and releases of InterProScan beyond version 5.14-53.0 will be hosted in a new location on GitHub: https://github.com/ebi-pf-team/interproscan/wiki

InterProScan 5.15-54.0 is scheduled for release in October 2015. To stay up-to-date with the latest InterProScan news you can join the mailing list or follow us on Twitter as described in https://code.google.com/p/interproscan/wiki/FAQ

Announcement - InterProScan 5.14-53.0 Released

A new version of InterProScan 5 (version 5.14-53.0) is available for download.

To obtain a copy, please visit the Introduction page for the complete documentation.

For more information on the bugs fixed and changes made in this update release please visit: InterProScan 5 (version 5.14-53.0) Release Notes

Announcement - InterProScan 5.13-52.0 Released

A new version of InterProScan 5 (version 5.13-52.0) is available for download.

To obtain a copy, please visit the Introduction page for the complete documentation.

For more information on the bugs fixed and changes made in this update release please visit: InterProScan 5 (version 5.13-52.0) Release Notes

Announcement - InterProScan 5.12-52.0 Released

A new version of InterProScan 5 (version 5.12-52.0) is available now.

To obtain a copy, please visit the Introduction page for the complete documentation.

For more information on the bugs fixed and changes made in this update release please visit: InterProScan 5 (version 5.12-52.0) Release Notes

Announcement - InterProScan 5.11-51.0 Released

A new version of InterProScan 5 (version 5.11-51.0) is available now.

To obtain a copy, please visit the Introduction page for the complete documentation.

For more information on the bugs fixed and changes made in this update release please visit: InterProScan 5 (version 5.11-51.0) Release Notes

Announcement - InterProScan 5.10-50.0 Released

A new version of InterProScan 5 (version 5.10-50.0) has been released.

To obtain a copy, please visit the Introduction page for the complete documentation.

For more information on the bugs fixed and changes made in this update release please visit: InterProScan 5 (version 5.10-50.0) Release Notes

Announcement - InterProScan 5.9-50.0 Released

We are pleased to announce that InterProScan 5 (version 5.9-50.0) is available for download.

To obtain a copy of this release, please visit the Introduction page for the complete documentation.

For more information on the bugs fixed and changes made in this update release please visit: InterProScan 5 (version 5.9-50.0) Release Notes

Announcement - InterProScan 5.8-49.0 Released

We are pleased to announce that InterProScan 5 (version 5.8-49.0) is available for download.

To obtain a copy of this release, please visit the Introduction page for the complete documentation.

For more information on the bugs fixed and changes made in this update release please visit: InterProScan 5 (version 5.8-49.0) Release Notes

Introduction

InterProScan is a bioinformatics tool that provides a one-stop-shop for automated sequence analysis of both protein and nucleic acid, the latter via a full six-frame translation. It offers the ability to identify both structural and functional regions of interest, based upon methods and models that have been generated by a large number of member groups ('member databases'). These member databases use a variety of different bioinformatic techniques and algorithms, optimised for specific feature types. InterProScan is therefore able to offer the researcher the ability to quickly characterize a new or novel sequence with considerable confidence.

InterProScan is being developed as an open source project at EMBL European Bioinformatics Institute (EBI).

This project is a complete re-write of the existing version of InterProScan (currently version 4, written in Perl). Version 5 of InterProScan is being developed to provide all of the existing functionality of the public InterProScan service with improved support for annotating nucleic acid sequences. It will also replace the existing internal pipeline used to generate the matches available from the InterPro database.

The beta version of InterProScan 5 is currently being in the metagenomics analysis pipeline used by the new EBI Metagenomics portal at the EBI.

Support

If you have any problems with any release of this software, please email mailto:support@ebi.ac.uk. For feedback about the software as it is developed (not support requests), please email mailto:interproscan-5-dev@googlegroups.com

Funding

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InterPro is currently funded by grant number 213037 from the European Union under the program "FP7 capacities: Scientific Data Repositories". The working title for the project is !IMproving Protein Annotation and Co-ordination using Technology (IMPACT).

InterPro is also funded by grant BB/F010508/1 from the BBSRC Bioinformatics and Biological Resources Fund.

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