IssueTracker

Android Studio is actually 0.8.11

The stack trace seems to say you are running with several definitions of one annotation. This seems to often be caused by including 2 different versions of the same library in an instrumentation apk and its tested application apk. Could you please check it's not your case here? If it's your case, you should fix that.

Looking at dx about this report, it seems that DX may fail to check a duplicate class definition when running multidex, I've recorded a bug about this point.

That said, it does not look like we could be in the DX lack of check case here, because mainDexClasses is keeping all the annotations in the main dex (and dx seems to correctly identify the duplicate definition when the 2 definitions are added to the same dex). (Can you confirm that you're using mainDexClasses to create your main dex list?)

I'm assigning back to you xav in case you want to add some check in the SDK.

The error is not reproducible in other machines, so it's probably a local config problem. We'll try the mainDexClasses approach.

[Comment deleted]

We're still looking into it. We're *not* using mainDexClasses because it wasn't documented or included on the SDK, and the only blog file that references it (written on Monday) mentions libraries to be preDexed, which isn't available while --multi-dex, and removing --multi-dex doesn't allow our app to build due to the 64k method limit.

The error is localized to my computer and only in 4/10 builds, so whenever I want something and it doesn't work I have to edit a file, rebuild and hope for the best.

We've run into the same issue as well. Right before the AndroidRuntime error, you should see dalvikvm error saying which class resolved by unexpected DEX (the orm-lite class). I suspect that has a nested static enum or classes? If you add that class in your multidex.keep file, does it fix your problem? Could you paste the dalvikvm log line you are seeing?

10-29 18:26:26.140  31690-31690/com.myapp.app W/dalvikvm﹕ Class resolved by unexpected DEX: Lcom/myapp/model/MyClass;(0x427a7898):0x596d1000 ref [Lcom/j256/ormlite/field/DataType;] Lcom/j256/ormlite/field/DataType;(0x427a7898):0x5910f000
10-29 18:26:26.140  31690-31690/com.myapp.app W/dalvikvm﹕ (Lcom/myapp/model/MyClass; had used a different Lcom/j256/ormlite/field/DataType; during pre-verification)
10-29 18:26:26.140  31690-31690/com.myapp.app W/dalvikvm﹕ Failed processing annotation value
10-29 18:26:26.140  31690-31690/com.myapp.app W/dalvikvm﹕ threadid=1: thread exiting with uncaught exception (group=0x41d28700)

I'll try and add that class to the multidex.keep

[Comment deleted]

After several attempts with mainDexClasses this is as far as I got

sudo ./mainDexClasses --output multidex.keep /Users/myuser/my_workspace/myapp/app/build/intermediates/dex/dev/debug;/Users/myuser/my_workspace/myapp/app/libs/android-support-multidex.jar;/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar;/Users/myuser/.gradle/caches/modules-2/files-2.1/com.fasterxml.jackson.core/jackson-core/2.2.4/95705b2e89a4101f2a82af6b303945755d7f93ab/jackson-core-2.2.4.jar;/Users/myuser/.gradle/caches/modules-2/files-2.1/com.fasterxml.jackson.core/jackson-annotations/2.2.4/9de62c96bb3e17eb909c107f2759c73650b5a8f1/jackson-annotations-2.2.4.jar;/Users/myuser/.gradle/caches/modules-2/files-2.1/com.fasterxml.jackson.core/jackson-databind/2.2.4/906cf5deb56ec1fb3ecbeceb08a1734ce9fed664/jackson-databind-2.2.4.jar
Password:
Error: The input doesn't contain any classes. Did you specify the proper '-injars' options?
-bash: /Users/myuser/my_workspace/myapp/app/libs/android-support-multidex.jar: cannot execute binary file
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 1: PK: command not found
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 2: xj?C: command not found
K-*??ϳR0?3??r,J??,K-?V?+????RKRSt?*?ules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 3:wj?C?I5?x?META-INF/MANIFEST.MF?M??LK-.?
                                    ?3R: No such file or directory
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 3: ?R?x??J3sJ???E???%??P?]??l?fz?f?@{: command not found
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 5: r2?K?V: command not found
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 6: sj?Ccom/PK: No such file or directory
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 7: sj?C: command not found
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 8: tj?Ccom/j256/ormlite/PK: No such file or directory
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 9: sj?Ccom/j256/ormlite/core/PK: No such file or directory
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 10: tj?Ccom/j256/ormlite/dao/PK: No such file or directory
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 11: tj?Ccom/j256/ormlite/db/PK: No such file or directory
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 12: tj?Ccom/j256/ormlite/field/PK: No such file or directory
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 13: tj?Ccom/j256/ormlite/field/types/PK: No such file or directory
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 14: tj?Ccom/j256/ormlite/logger/PK: No such file or directory
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 15: tj?Ccom/j256/ormlite/misc/PK: No such file or directory
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 16: tj?Ccom/j256/ormlite/stmt/PK: No such file or directory
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 17: tj?Ccom/j256/ormlite/stmt/mapped/PK: No such file or directory
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 18: tj?Ccom/j256/ormlite/stmt/query/PK: No such file or directory
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 19: tj?Ccom/j256/ormlite/support/PK: No such file or directory
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 20: tj?Ccom/j256/ormlite/table/PK: No such file or directory
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 21:sj?C?0??L!com/j256/ormlite/core/LICENSE.txtURMs?: No such file or directory
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 24: syntax error near unexpected token `)'
/Users/myuser/.gradle/caches/modules-2/files-2.1/com.j256.ormlite/ormlite-core/4.48/e579bd2905d0399af5029aaaf9817d5fa0ca88a5/ormlite-core-4.48.jar: line 24: `"?@?h/Ѯ??)???????j?
p??ah5EbH???Ь.a_S???c"'                                                                                                                                                              {`M??d??c????N?[n????
-bash: /Users/myuser/.gradle/caches/modules-2/files-2.1/com.fasterxml.jackson.core/jackson-core/2.2.4/95705b2e89a4101f2a82af6b303945755d7f93ab/jackson-core-2.2.4.jar: cannot execute binary file
-bash: /Users/myuser/.gradle/caches/modules-2/files-2.1/com.fasterxml.jackson.core/jackson-annotations/2.2.4/9de62c96bb3e17eb909c107f2759c73650b5a8f1/jackson-annotations-2.2.4.jar: cannot execute binary file
-bash: /Users/myuser/.gradle/caches/modules-2/files-2.1/com.fasterxml.jackson.core/jackson-databind/2.2.4/906cf5deb56ec1fb3ecbeceb08a1734ce9fed664/jackson-databind-2.2.4.jar: cannot execute binary file


The output file is empty.

[Comment deleted]

Changed /Users/myuser/my_workspace/myapp/app/build/intermediates/dex/dev/debug to /Users/myuser/my_workspace/myapp/app/build/intermediates/classes/dev/debug and the multidex.keep at least got my project's classes

Seems to be working so far.

Same error with the new multiDex system (multiDexEnabled true)
I added the multidex instrumentation but it conflicts with the multidex lib added automatically by multiDexEnabled.
And the classes with annotation doesn't works.

Same issue as well after updating to the new multiDex system, Nitro have you had any luck yet?

No, I reverted to the old multidex system for now (I'm working on a project with a dead-line).
What I could find :
Using Build-Tools 21.1.0, gradle plugin 0.14.1 and AS 0.9.1

Having multiDexEnabled true :
in dependencies, you need to remove
compile 'com.android.support:multidex:1.0.0'
because it's already included by multiDexEnabled

same for
androidTestCompile('com.android.support:multidex-instrumentation:1.0.0') that include com.android.support:multidex:1.0.0
so need to do :
androidTestCompile('com.android.support:multidex-instrumentation:1.0.0') {
        exclude module: 'multidex'
    }

Then sometimes it couldn't find the instrumentation MultiDexTestRunner so I created a class implementing it for my tests and added it with :
testInstrumentationRunner "com.package.DexInstrumentationTestRunner"


So... it should works but on my project we use jackson annotations and it results with the error :
java.lang.IllegalAccessError: Class ref in pre-verified class resolved to unexpected implementation
    at java.lang.reflect.Field.getAnnotation(Native Method)

and the same :

10-29 18:26:26.140  31690-31690/com.myapp.app W/dalvikvm﹕ Class resolved by unexpected DEX: JsonInclude$Include...
10-29 18:26:26.140  31690-31690/com.myapp.app W/dalvikvm﹕ xxx had used a different xxx; during pre-verification)
10-29 18:26:26.140  31690-31690/com.myapp.app W/dalvikvm﹕ Failed processing annotation value

target version 21, same for subprojects...
Here's my dependencies :

androidTestCompile - Classpath for compiling the androidTest sources.
\--- com.squareup.okhttp:mockwebserver:2.0.0
     \--- org.bouncycastle:bcprov-jdk15on:1.50

compile - Classpath for compiling the main sources.
+--- project :libraries:extendedCalendarView
|    \--- com.android.support:multidex:1.0.0
+--- project :libraries:facebook
|    +--- com.android.support:multidex:1.0.0
|    +--- com.android.support:support-v4:20.0.0 -> 21.0.0
|    |    \--- com.android.support:support-annotations:21.0.0
|    \--- com.parse.bolts:bolts-android:1.1.3
+--- project :libraries:viewpagerindicator
|    +--- com.android.support:multidex:1.0.0
|    \--- com.android.support:support-v4:20.0.0 -> 21.0.0 (*)
+--- com.android.support:support-v4:21.0.0 (*)
+--- com.google.android.gms:play-services:4.+ -> 4.4.52
|    \--- com.android.support:support-v4:19.0.1 -> 21.0.0 (*)
+--- com.google.http-client:google-http-client-android:1.12.0-beta
+--- com.google.guava:guava-jdk5:17.0
+--- com.google.protobuf:protobuf-java:2.5.0
+--- com.google.api-client:google-api-client:1.19.0
|    +--- com.google.oauth-client:google-oauth-client:1.19.0
|    |    +--- com.google.http-client:google-http-client:1.19.0
|    |    |    \--- com.google.code.findbugs:jsr305:1.3.9
|    |    \--- com.google.code.findbugs:jsr305:1.3.9
|    +--- com.google.http-client:google-http-client-jackson2:1.19.0
|    |    +--- com.google.http-client:google-http-client:1.19.0 (*)
|    |    \--- com.fasterxml.jackson.core:jackson-core:2.1.3 -> 2.4.3
|    \--- com.google.guava:guava-jdk5:13.0 -> 17.0
+--- com.squareup.retrofit:retrofit:1.6.1
|    \--- com.google.code.gson:gson:2.2.4
+--- de.greenrobot:eventbus:2.2.1
+--- com.fasterxml.jackson.core:jackson-annotations:2.4.3
+--- com.fasterxml.jackson.core:jackson-databind:2.4.3
|    \--- com.fasterxml.jackson.core:jackson-core:2.4.3
+--- com.fasterxml.jackson.core:jackson-core:2.4.3
+--- com.path:android-priority-jobqueue:1.1.2
|    \--- com.google.android:android:2.2.1
|         +--- commons-logging:commons-logging:1.1.1
|         +--- org.apache.httpcomponents:httpclient:4.0.1
|         |    +--- org.apache.httpcomponents:httpcore:4.0.1
|         |    +--- commons-logging:commons-logging:1.1.1
|         |    \--- commons-codec:commons-codec:1.3 -> 1.9
|         +--- org.khronos:opengl-api:gl1.1-android-2.1_r1
|         +--- xerces:xmlParserAPIs:2.6.2
|         +--- xpp3:xpp3:1.1.4c
|         \--- org.json:json:20080701
+--- com.squareup.okhttp:okhttp:2.0.0
|    \--- com.squareup.okio:okio:1.0.0 -> 1.0.1
+--- com.squareup.okhttp:okhttp-urlconnection:2.0.0
|    \--- com.squareup.okhttp:okhttp:2.0.0 (*)
+--- com.squareup.okio:okio:1.0.1
+--- org.chalup.microorm:microorm:0.4.1
|    \--- com.google.guava:guava:16.0
+--- commons-codec:commons-codec:1.9
+--- com.squareup.picasso:picasso:2.3.4
+--- com.jakewharton:butterknife:5.1.2
+--- info.hoang8f:android-segmented:1.0.2
+--- com.github.chrisbanes.photoview:library:1.2.3
+--- com.google.maps.android:android-maps-utils:0.3.1
|    \--- com.google.android.gms:play-services:4.3+ -> 4.4.52 (*)
+--- com.jayway.android.robotium:robotium-solo:5.2.1
\--- org.fusesource.mqtt-client:mqtt-client:1.10
     +--- org.fusesource.hawtdispatch:hawtdispatch-transport:1.20
     |    \--- org.fusesource.hawtdispatch:hawtdispatch:1.20
     \--- org.fusesource.hawtbuf:hawtbuf:1.10

As you can see there are only one jackson include ! I tried everything and was pretty pissed... But I'm not mad against anyone, and the multiDexEnabled is pretty awesome (though the new guide that came out is already outdated http://developer.android.com/tools/building/multidex.html#testing ). I hope it will be fixed as soon as possible !

From the documentation:

There are complex requirements regarding what classes are needed in the primary dex file when executing in the Dalvik runtime. The Android build tooling updates handle the Android requirements, but it is possible that other included libraries have additional dependency requirements including the use of introspection or invocation of Java methods from native code. Some libraries may not be able to be used until the multidex build tools are updated to allow you to specify classes that must be included in the primary dex file.


So as of today multidex builds are not deterministic.

Yeah, I read that part. But as I said, the doc seems to have been made before the new multiDexEnabled = true system.
Why ? because in the build folder, there is a folder multidex containing a file with all the class that should be on the first dex (mainDexClasses).
And there was the JsonInclude.Class that made all my run failed, so it seems it should work !
I don't know where the problem is but my doubt are about the dx command.

[Comment deleted]

The file is called maindexlist.txt and here's the result (without my app's packages) :
com/fasterxml/jackson/annotation/JsonTypeId.class
android/support/annotation/RawRes.class
com/dsi/ant/AntInterface.class
com/google/android/gms/common/GooglePlayServicesClient$ConnectionCallbacks.class
com/facebook/model/GraphObjectList.class
android/support/annotation/LayoutRes.class
com/fasterxml/jackson/annotation/JsonGetter.class
com/fasterxml/jackson/annotation/JsonAutoDetect$1.class
android/support/annotation/XmlRes.class
com/fasterxml/jackson/annotation/JsonValue.class
com/facebook/AuthorizationClient$BackgroundProcessingListener.class
javax/annotation/meta/When.class
javax/annotation/Nullable.class
android/support/annotation/ColorRes.class
com/fasterxml/jackson/annotation/JsonUnwrapped.class
javax/annotation/Untainted.class
android/support/v4/app/FragmentManagerImpl$3.class
retrofit/http/GET.class
com/path/android/jobqueue/BaseJob.class
com/google/common/annotations/GwtCompatible.class
com/fasterxml/jackson/annotation/JsonManagedReference.class
com/fasterxml/jackson/annotation/JsonAutoDetect$Visibility.class
com/fasterxml/jackson/databind/annotation/JacksonStdImpl.class
com/fasterxml/jackson/annotation/JsonCreator.class
butterknife/OnItemClick.class
javax/annotation/meta/TypeQualifierValidator.class
android/support/v4/app/FragmentContainer.class
android/support/multidex/MultiDex$V19.class
com/facebook/model/GraphMultiResult.class
com/google/ads/mediation/MediationServerParameters$MappingException.class
com/path/android/jobqueue/Job.class
com/facebook/SessionState.class
com/path/android/jobqueue/config/Configuration.class
com/fasterxml/jackson/databind/util/Converter$None.class
retrofit/http/EncodedQueryMap.class
com/fasterxml/jackson/annotation/SimpleObjectIdResolver.class
android/support/v4/util/DebugUtils.class
com/facebook/AuthorizationClient$Result.class
com/fasterxml/jackson/annotation/JsonAnyGetter.class
retrofit/http/Field.class
retrofit/http/Multipart.class
android/support/v4/app/LoaderManager.class
android/support/multidex/MultiDex.class
javax/annotation/WillNotClose.class
com/facebook/Settings.class
com/facebook/Request.class
com/google/api/client/util/Key.class
com/fasterxml/jackson/annotation/JsonAnySetter.class
com/facebook/widget/LoginButton.class
android/support/annotation/AttrRes.class
android/support/annotation/StyleRes.class
javax/annotation/Nonnull$Checker.class
android/support/v4/app/NotificationCompat.class
javax/annotation/meta/TypeQualifierNickname.class
android/support/v4/app/NoSaveStateFrameLayout.class
com/fasterxml/jackson/annotation/JsonFilter.class
com/facebook/Session$4.class
android/support/annotation/PluralsRes.class
android/support/v4/app/FragmentManager$BackStackEntry.class
com/fasterxml/jackson/annotation/JsonRootName.class
android/support/v4/widget/MaterialProgressDrawable$3.class
com/fasterxml/jackson/databind/annotation/JsonPOJOBuilder$Value.class
android/support/v4/widget/MaterialProgressDrawable$StartCurveInterpolator.class
butterknife/OnEditorAction.class
android/support/annotation/NonNull.class
butterknife/Optional.class
android/support/v4/widget/DrawerLayoutImpl.class
retrofit/http/PATCH.class
com/facebook/Session$StatusCallback.class
com/fasterxml/jackson/databind/jsonFormatVisitors/JsonFormatVisitorWithSerializerProvider.class
com/fasterxml/jackson/annotation/JsonSubTypes.class
com/google/gson/annotations/Since.class
org/sidibe/mqtt/android/lib/MqttPushEventListener.class
butterknife/OnTextChanged.class
com/google/common/annotations/GwtIncompatible.class
com/google/protobuf/AbstractMessageLite.class
butterknife/OnCheckedChanged.class
com/path/android/jobqueue/JobManager.class
android/support/v4/app/Fragment.class
butterknife/internal/ListenerClass.class
com/google/android/gms/location/DetectedActivity.class
android/support/v4/widget/MaterialProgressDrawable$4.class
com/facebook/SessionDefaultAudience.class
android/support/v4/app/ActivityCompat.class
android/support/v4/view/ViewPager$OnPageChangeListener.class
retrofit/http/RestMethod.class
fr/openium/androkit/ConfigApp.class
android/support/v4/widget/MaterialProgressDrawable$EndCurveInterpolator.class
retrofit/http/Streaming.class
com/google/common/annotations/VisibleForTesting.class
com/fasterxml/jackson/annotation/ObjectIdGenerator.class
com/google/api/client/util/NullValue.class
com/google/api/client/util/Beta.class
retrofit/http/POST.class
retrofit/http/PUT.class
javax/annotation/Signed.class
butterknife/OnItemSelected$Callback.class
com/google/gson/annotations/Expose.class
com/path/android/jobqueue/log/CustomLogger.class
javax/annotation/ParametersAreNonnullByDefault.class
android/support/v4/app/FragmentActivity.class
android/support/v4/widget/MaterialProgressDrawable$1.class
com/fasterxml/jackson/databind/annotation/JsonPOJOBuilder.class
com/google/api/client/json/JsonPolymorphicTypeMap$TypeDef.class
android/support/annotation/StringDef.class
com/google/gson/annotations/Until.class
com/fasterxml/jackson/annotation/JsonInclude.class
com/fasterxml/jackson/databind/KeyDeserializer.class
com/facebook/AccessTokenSource.class
android/support/v4/app/ListFragment.class
com/facebook/AppEventsLogger.class
android/support/v4/app/FragmentActivity$NonConfigurationInstances.class
com/fasterxml/jackson/databind/JsonMappingException.class
com/fasterxml/jackson/databind/JsonSerializer$None.class
com/facebook/AuthorizationClient$Result$Code.class
com/fasterxml/jackson/core/JsonProcessingException.class
com/fasterxml/jackson/databind/JsonDeserializer$None.class
retrofit/http/DELETE.class
com/fasterxml/jackson/databind/annotation/JsonDeserialize.class
com/fasterxml/jackson/databind/JsonSerializer.class
com/facebook/Session$TokenRefreshRequestHandler.class
org/chalup/microorm/annotations/Column.class
com/facebook/AuthorizationClient$AuthorizationRequest.class
com/facebook/android/R.class
com/google/api/client/json/JsonString.class
com/fasterxml/jackson/annotation/JacksonAnnotationsInside.class
android/support/annotation/IntDef.class
com/google/android/gms/location/LocationListener.class
android/support/v4/widget/DrawerLayout.class
butterknife/OnLongClick.class
android/support/v4/widget/MaterialProgressDrawable$ProgressDrawableSize.class
com/fasterxml/jackson/annotation/JsonIdentityInfo.class
butterknife/OnPageChange$Callback.class
android/support/v4/app/ActivityCompatHoneycomb.class
com/google/common/annotations/Beta.class
com/google/protobuf/MessageLiteOrBuilder.class
com/fasterxml/jackson/annotation/JsonTypeInfo$As.class
javax/annotation/Nonnegative.class
com/google/gson/annotations/SerializedName.class
com/fasterxml/jackson/annotation/JsonIgnore.class
com/google/api/client/repackaged/com/google/common/annotations/VisibleForTesting.class
com/fasterxml/jackson/databind/util/Converter.class
android/support/v4/app/FragmentManager$OnBackStackChangedListener.class
com/facebook/internal/Utility.class
retrofit/http/FormUrlEncoded.class
javax/annotation/RegEx.class
butterknife/OnClick.class
android/support/v4/app/FragmentActivity$1.class
butterknife/ButterKnife.class
com/facebook/internal/Validate.class
butterknife/OnTouch.class
android/support/v4/app/LoaderManagerImpl.class
com/fasterxml/jackson/annotation/JsonTypeInfo$None.class
com/google/protobuf/InvalidProtocolBufferException.class
android/support/annotation/Nullable.class
android/support/multidex/MultiDex$V14.class
android/support/v4/app/FragmentManagerImpl$4.class
android/support/multidex/MultiDexApplication.class
retrofit/http/EncodedPath.class
com/fasterxml/jackson/databind/jsonschema/JsonSerializableSchema.class
com/facebook/AccessToken.class
com/facebook/model/CreateGraphObject.class
com/facebook/Session$2.class
com/google/common/eventbus/AllowConcurrentEvents.class
android/support/v4/content/LocalBroadcastManager.class
android/support/v4/content/ContextCompat.class
com/facebook/android/R$id.class
android/support/v4/app/FragmentManagerState.class
com/fasterxml/jackson/annotation/JsonIgnoreProperties.class
com/google/android/gms/location/ActivityRecognitionClient.class
com/google/ads/mediation/MediationServerParameters.class
android/support/v4/app/ActionBarDrawerToggle.class
butterknife/OnItemLongClick.class
javax/annotation/meta/Exhaustive.class
com/fasterxml/jackson/annotation/JsonSubTypes$Type.class
javax/annotation/WillClose.class
javax/annotation/Nonnull.class
fr/openium/androkit/utils/ToastUtils.class
retrofit/http/Headers.class
com/facebook/Session$PermissionsPair.class
javax/annotation/WillCloseWhenClosed.class
android/support/v4/app/FragmentManagerImpl$FragmentTag.class
android/support/annotation/IdRes.class
com/facebook/Response.class
android/support/v4/app/FragmentManagerImpl$5.class
retrofit/http/HEAD.class
javax/annotation/CheckForSigned.class
javax/annotation/CheckForNull.class
com/google/ads/mediation/MediationServerParameters$Parameter.class
com/facebook/Session$1.class
butterknife/InjectViews.class
com/fasterxml/jackson/annotation/JsonFormat$Value.class
android/support/annotation/FractionRes.class
com/fasterxml/jackson/annotation/JsonTypeInfo$Id.class
com/fasterxml/jackson/annotation/JsonIgnoreType.class
com/fasterxml/jackson/annotation/ObjectIdGenerator$IdKey.class
com/facebook/FacebookAuthorizationException.class
javax/annotation/ParametersAreNullableByDefault.class
com/facebook/Session.class
javax/annotation/Nonnegative$Checker.class
android/support/annotation/DimenRes.class
android/support/annotation/AnyRes.class
com/fasterxml/jackson/annotation/JacksonAnnotation.class
com/facebook/model/GraphObject.class
javax/annotation/CheckReturnValue.class
com/facebook/FacebookOperationCanceledException.class
android/support/annotation/IntegerRes.class
android/support/multidex/MultiDexExtractor$1.class
com/facebook/UiLifecycleHelper.class
android/support/v4/app/BackStackRecord$TransitionState.class
com/fasterxml/jackson/annotation/JsonView.class
android/support/annotation/MenuRes.class
com/fasterxml/jackson/annotation/JsonRawValue.class
retrofit/http/Query.class
com/google/android/gms/common/annotation/KeepName.class
org/chalup/microorm/MicroOrm.class
com/facebook/FacebookException.class
android/support/multidex/MultiDexExtractor.class
android/support/v4/app/FragmentManagerImpl$2.class
android/support/v4/util/SimpleArrayMap.class
javax/annotation/MatchesPattern$Checker.class
com/fasterxml/jackson/databind/annotation/JsonNaming.class
android/support/multidex/MultiDex$V4.class
android/support/annotation/DrawableRes.class
android/support/v4/app/BackStackState.class
javax/annotation/concurrent/GuardedBy.class
android/support/v4/app/NotificationCompat$Builder.class
com/fasterxml/jackson/databind/jsonFormatVisitors/JsonFormatVisitable.class
com/facebook/Session$TokenRefreshRequest.class
com/facebook/AuthorizationClient$OnCompletedListener.class
com/facebook/LoginActivity.class
org/sidibe/mqtt/android/lib/MqttTopic.class
com/fasterxml/jackson/annotation/JsonPropertyOrder.class
butterknife/OnTextChanged$Callback.class
com/google/android/gms/common/GooglePlayServicesClient.class
javax/annotation/Tainted.class
retrofit/http/FieldMap.class
com/google/android/gms/internal/dw.class
com/fasterxml/jackson/databind/KeyDeserializer$None.class
retrofit/http/QueryMap.class
javax/annotation/Detainted.class
org/fusesource/hawtdispatch/jmx/MBeanInfo.class
android/support/annotation/ArrayRes.class
android/support/v4/app/Fragment$SavedState.class
butterknife/OnItemSelected.class
com/facebook/LoginActivity$1.class
retrofit/http/PartMap.class
android/support/v4/app/FragmentState.class
android/support/v4/app/FragmentActivity$2.class
com/fasterxml/jackson/databind/annotation/JsonSerialize$Inclusion.class
android/support/v4/app/FragmentManagerImpl$1.class
com/fasterxml/jackson/annotation/JsonSetter.class
javax/annotation/OverridingMethodsMustInvokeSuper.class
android/support/multidex/ZipUtil$CentralDirectory.class
com/fasterxml/jackson/databind/jsontype/TypeDeserializer.class
com/facebook/Session$StartActivityDelegate.class
com/facebook/AuthorizationClient.class
retrofit/http/EncodedQuery.class
javax/annotation/Syntax.class
com/facebook/Session$3.class
com/fasterxml/jackson/annotation/JsonFormat$Shape.class
com/facebook/SessionLoginBehavior.class
com/facebook/android/R$layout.class
com/facebook/Session$SerializationProxyV2.class
android/support/v4/util/LogWriter.class
retrofit/http/Body.class
com/google/android/gms/maps/SupportMapFragment.class
javax/annotation/meta/TypeQualifierDefault.class
com/path/android/jobqueue/config/Configuration$Builder.class
com/fasterxml/jackson/annotation/JsonAutoDetect.class
fr/openium/androkit/utils/MemoryUtils.class
com/tyczj/extendedcalendarview/CalendarProvider$DatabaseHelper.class
com/facebook/Request$Callback.class
com/facebook/internal/SessionAuthorizationType.class
android/support/annotation/AnimatorRes.class
javax/annotation/meta/Exclusive.class
android/support/v4/app/SuperNotCalledException.class
android/support/annotation/AnimRes.class
com/facebook/Session$AutoPublishAsyncTask.class
com/fasterxml/jackson/annotation/JsonInclude$Include.class
com/google/protobuf/MessageLite.class
com/google/api/client/json/JsonPolymorphicTypeMap.class
com/google/android/gms/location/ActivityRecognitionResult.class
com/fasterxml/jackson/databind/annotation/JsonSerialize$Typing.class
com/fasterxml/jackson/databind/annotation/JsonValueInstantiator.class
android/support/v4/widget/DrawerLayout$DrawerListener.class
com/google/api/client/util/Value.class
org/chalup/microorm/annotations/Embedded.class
com/fasterxml/jackson/annotation/JsonFormat.class
com/path/android/jobqueue/network/NetworkEventProvider$Listener.class
android/support/annotation/StringRes.class
javax/annotation/concurrent/Immutable.class
com/google/android/gms/common/GooglePlayServicesClient$OnConnectionFailedListener.class
android/support/annotation/StyleableRes.class
android/support/v4/widget/MaterialProgressDrawable$2.class
com/facebook/SharedPreferencesTokenCachingStrategy.class
android/support/v4/app/LoaderManager$LoaderCallbacks.class
android/support/annotation/InterpolatorRes.class
javax/annotation/concurrent/NotThreadSafe.class
android/support/v4/widget/MaterialProgressDrawable$Ring.class
org/sidibe/mqtt/android/lib/MqttAndroidClient.class
com/facebook/Session$5.class
butterknife/internal/ListenerClass$NONE.class
com/google/protobuf/GeneratedMessageLite.class
butterknife/OnFocusChange.class
com/fasterxml/jackson/annotation/JsonIdentityReference.class
com/tyczj/extendedcalendarview/CalendarProvider.class
com/facebook/Session$OpenRequest.class
com/fasterxml/jackson/annotation/JsonPropertyDescription.class
com/google/android/gms/maps/model/LatLng.class
javax/annotation/RegEx$Checker.class
retrofit/http/Path.class
javax/annotation/concurrent/ThreadSafe.class
com/fasterxml/jackson/annotation/JsonTypeName.class
com/facebook/Session$NewPermissionsRequest.class
com/fasterxml/jackson/databind/annotation/JsonSerialize.class
retrofit/http/Part.class
com/fasterxml/jackson/annotation/JsonTypeInfo.class
com/facebook/Session$Builder.class
com/fasterxml/jackson/annotation/ObjectIdResolver.class
android/support/v4/widget/MaterialProgressDrawable.class
com/google/android/gms/common/internal/safeparcel/SafeParcelable.class
com/facebook/model/PropertyName.class
com/fasterxml/jackson/annotation/JsonProperty.class
com/fasterxml/jackson/databind/JsonDeserializer.class
android/support/v4/app/DialogFragment.class
com/facebook/TokenCachingStrategy.class
com/google/api/client/repackaged/com/google/common/annotations/GwtCompatible.class
butterknife/InjectView.class
android/support/v4/app/FragmentTransaction.class
com/facebook/Session$SerializationProxyV1.class
android/support/v4/widget/MaterialProgressDrawable$5.class
android/support/v4/app/FragmentManagerImpl.class
android/support/v4/app/BackStackRecord.class
retrofit/http/Header.class
butterknife/OnPageChange.class
javax/annotation/meta/TypeQualifier.class
com/google/common/eventbus/Subscribe.class
butterknife/internal/ListenerMethod.class
com/facebook/Session$AuthorizationRequest.class
com/facebook/LoginActivity$2.class
com/fasterxml/jackson/databind/annotation/JsonTypeResolver.class
javax/annotation/PropertyKey.class
com/google/protobuf/Internal$EnumLite.class
com/fasterxml/jackson/annotation/JsonBackReference.class
com/fasterxml/jackson/databind/annotation/JsonTypeIdResolver.class
javax/annotation/MatchesPattern.class
com/google/api/client/repackaged/com/google/common/annotations/Beta.class
android/support/multidex/ZipUtil.class
android/support/annotation/BoolRes.class
com/fasterxml/jackson/annotation/JacksonInject.class
android/support/v4/app/FragmentManager.class
org/sidibe/mqtt/android/lib/MqttClientState.class
com/fasterxml/jackson/databind/jsonFormatVisitors/JsonFormatVisitorWrapper.class

You can see that jackson is present so it should be in the first dex, so it should works ! (lots of should).

I've looked into this problem a little more today: unlike what I've said before, you don't need to have different versions of one class to face it. Having the exact same class defined twice in 2 different dexes is enough.

In the following error:
"0-29 18:26:26.140  31690-31690/com.myapp.app W/dalvikvm﹕ Class resolved by unexpected DEX: Lcom/myapp/model/MyClass;(0x427a7898):0x596d1000 ref [Lcom/j256/ormlite/field/DataType;] Lcom/j256/ormlite/field/DataType;(0x427a7898):0x5910f000
10-29 18:26:26.140  31690-31690/com.myapp.app W/dalvikvm﹕ (Lcom/myapp/model/MyClass; had used a different Lcom/j256/ormlite/field/DataType; during pre-verification)
10-29 18:26:26.140  31690-31690/com.myapp.app W/dalvikvm﹕ Failed processing annotation value
10-29 18:26:26.140  31690-31690/com.myapp.app W/dalvikvm﹕ threadid=1: thread exiting with uncaught exception (group=0x41d28700)"
My guess is that you face it because of com/j256/ormlite/field/DataType defined in the instrumentation apk and in the application apk. I can't be sure without seeing those apks but you can try to do it yourself by running dexdump on each dex of the application apk and on the instrumentation apk.

If you give me a safe sharing place or I can run it through the business unit I'm happy to share.

The safest would probably be you running dexdump:
You can find the tool in <sdk-path>/build-tools/<version>/dexdump<.exe?>

You'll have then to run
dexdump <instrumentation.apk>  | grep "Class descriptor" | grep com/j256/ormlite/field/DataType
then unzip the application apk in a folder and run in this folder
dexdump classes.dex  | grep "Class descriptor" | grep com/j256/ormlite/field/DataType
dexdump classes2.dex  | grep "Class descriptor" | grep com/j256/ormlite/field/DataType
dexdump classes3.dex  | grep "Class descriptor" | grep com/j256/ormlite/field/DataType
... untill you've run it on all dex files

do the same for com/myapp/model/MyClass and just report here where the 2 classes were found.

If you're running a Windows I think you can replace grep by something like:
findstr /c:"com/j256/ormlite/field/DataType"

Here's my result :
Background =>
-An application using Retrofit and Jackson for get/post query. I have an object Form that I use to post data to a rest service. Form have the annotation JsonInclude(NonNull) that remove the fields of the class Form that are null.

I have a Test Application that send a fake Form but the problem occurs also in the app alone (not in test environement).

-------

So the two classes are :
com/fasterxml/jackson/annotation/JsonInclude$Include <= annotation
and
com/myapp/Form <= class using annotation

--------

I ran dexdump and I could see that :
-Neither are in the test apk (apk-debug-test-unaligned.apk)
-In the app apk (apk-debug.apk) the classes.dex contains the annotation (com/fasterxml/jackson/annotation/JsonInclude$Include and com/fasterxml/jackson/annotation/JsonInclude) and classes2.dex contains the class (com/myapp/Form)
No duplications.
I hope it helps.

Ok I have good news :)
I succeeded in reproducing the bug on a test project (in attachment).
Import it in Android studio, and run the class TestBugReplicator (from androidTest), with the Runner "com.testbug.DexInstrumentation".
You'll get the error. (at least I have)
I tried to make the project as little/simple as I could.
Thank you !
BTW : I use OS X Yosemite 10.10 on a Macbook Air.

So if you have no duplicate this does not look like a packaging issue any more. Can you please tell me which device + android version you used to run the test?

Thank you for the reproduction project, I'll try it soon.

I used my Galaxy S5 on Android 4.4.2, and an automatically created emulator (using Jenkins) on 4.4.4 too. Same on a Genymotion VM, and a Nexus 4 (4.4.4).

I was not able to reproduce directly with the given project. Anyway I managed to force it in the attached apk with a simpler test class (source attached too), force the rest of the test I kept the given project just playing with manifest and packaging to force classes partition.

Unfortunately I don't understand what's exactly happening into Dalvik.

Brian, I'm assigning to you hoping you'll be able to explain me why Dalvik is complaining there.

To reproduce, just do:
adb shell am instrument -w -r  -e debug false com.testbug/com.testbug.DexInstrumentation

and you'll see in the logcat:

W/dalvikvm( 6671): Class resolved by unexpected DEX: Lcom/testbug/ResponseWeather;(0x4137c748):0x50c55000 ref [Lcom/fasterxml/jackson/annotation/JsonInclude$Include;] Lcom/fasterxml/jackson/annotation/JsonInclude$Include;(0x4137c748):0x4deff000
W/dalvikvm( 6671): (Lcom/testbug/ResponseWeather; had used a different Lcom/fasterxml/jackson/annotation/JsonInclude$Include; during pre-verification)
D/dalvikvm( 6671): threadid=11: still suspended after undo (sc=1 dc=1)
W/dalvikvm( 6671): Failed processing annotation value
I/TestRunner( 6671): failed: testAnnotation(com.testbug.TestBugReplicator)
I/TestRunner( 6671): ----- begin exception -----
I/TestRunner( 6671):
I/TestRunner( 6671): java.lang.IllegalAccessError: Class ref in pre-verified class resolved to unexpected implementation
I/TestRunner( 6671):    at java.lang.Class.getDeclaredAnnotations(Native Method)
I/TestRunner( 6671):    at java.lang.Class.getAnnotations(Class.java:297)
I/TestRunner( 6671):    at com.testbug.TestBugReplicator.testAnnotation(TestBugReplicator.java:14)
I/TestRunner( 6671):    at java.lang.reflect.Method.invokeNative(Native Method)
I/TestRunner( 6671):    at java.lang.reflect.Method.invoke(Method.java:511)
I/TestRunner( 6671):    at junit.framework.TestCase.runTest(TestCase.java:168)
I/TestRunner( 6671):    at junit.framework.TestCase.runBare(TestCase.java:134)
I/TestRunner( 6671):    at junit.framework.TestResult$1.protect(TestResult.java:115)
I/TestRunner( 6671):    at junit.framework.TestResult.runProtected(TestResult.java:133)
I/TestRunner( 6671):    at junit.framework.TestResult.run(TestResult.java:118)
I/TestRunner( 6671):    at junit.framework.TestCase.run(TestCase.java:124)
I/TestRunner( 6671):    at android.test.AndroidTestRunner.runTest(AndroidTestRunner.java:190)
I/TestRunner( 6671):    at android.test.AndroidTestRunner.runTest(AndroidTestRunner.java:175)
I/TestRunner( 6671):    at android.test.InstrumentationTestRunner.onStart(InstrumentationTestRunner.java:555)
I/TestRunner( 6671):    at android.app.Instrumentation$InstrumentationThread.run(Instrumentation.java:1584)
I/TestRunner( 6671): ----- end exception -----

I didn't manage to reproduce on the simpler cases I tried.
At first I suspected dvmResolveClass bug or called with the wrong fromUnverifiedConstant value. But it's maybe more complicated than that.

Sorry for my english)

I faced the same exception. Here is log:

W/dalvikvm﹕ Class resolved by unexpected DEX: Lcom/myproject/core/data/item/ItemPrice;(0x427b9f70):0x58002000 ref [Lcom/j256/ormlite/field/DataType;] Lcom/j256/ormlite/field/DataType;(0x427b9f70):0x596cf000
11-10 16:30:20.764  25799-26287/com.myproject W/dalvikvm﹕ (Lcom/myproject/core/data/item/ItemPrice; had used a different Lcom/j256/ormlite/field/DataType; during pre-verification)
11-10 16:30:20.764  25799-26287/com.myproject W/dalvikvm﹕ Failed processing annotation value
11-10 16:30:20.764  25799-26287/com.myproject D/dalvikvm﹕ Failed creating an annotation
11-10 16:30:20.764  25799-26287/com.myproject W/dalvikvm﹕ threadid=15: thread exiting with uncaught exception (group=0x41d5c700)
11-10 16:30:20.779  25799-26287/com.myproject W/System.err﹕ java.lang.IllegalAccessError: Class ref in pre-verified class resolved to unexpected implementation
11-10 16:30:20.779  25799-26287/com.myproject W/System.err﹕ at java.lang.reflect.Field.getDeclaredAnnotations(Native Method)
11-10 16:30:20.779  25799-26287/com.myproject W/System.err﹕ at java.lang.reflect.Field.getDeclaredAnnotations(Field.java:204)
11-10 16:30:20.779  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.introspect.AnnotatedClass._constructField(AnnotatedClass.java:808)
11-10 16:30:20.779  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.introspect.AnnotatedClass._findFields(AnnotatedClass.java:688)
11-10 16:30:20.779  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.introspect.AnnotatedClass.resolveFields(AnnotatedClass.java:462)
11-10 16:30:20.779  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.introspect.AnnotatedClass.fields(AnnotatedClass.java:274)
11-10 16:30:20.779  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.introspect.POJOPropertiesCollector._addFields(POJOPropertiesCollector.java:363)
11-10 16:30:20.779  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.introspect.POJOPropertiesCollector.collect(POJOPropertiesCollector.java:232)
11-10 16:30:20.779  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.introspect.BasicClassIntrospector.collectProperties(BasicClassIntrospector.java:142)
11-10 16:30:20.779  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.introspect.BasicClassIntrospector.forDeserialization(BasicClassIntrospector.java:81)
11-10 16:30:20.779  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.introspect.BasicClassIntrospector.forDeserialization(BasicClassIntrospector.java:11)
11-10 16:30:20.779  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.DeserializationConfig.introspect(DeserializationConfig.java:507)
11-10 16:30:20.779  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.deser.DeserializerCache._createDeserializer(DeserializerCache.java:329)
11-10 16:30:20.779  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.deser.DeserializerCache._createAndCache2(DeserializerCache.java:267)
11-10 16:30:20.779  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.deser.DeserializerCache._createAndCacheValueDeserializer(DeserializerCache.java:247)
11-10 16:30:20.784  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.deser.DeserializerCache.findValueDeserializer(DeserializerCache.java:146)
11-10 16:30:20.784  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.DeserializationContext.findContextualValueDeserializer(DeserializationContext.java:305)
11-10 16:30:20.784  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.deser.std.StdDeserializer.findDeserializer(StdDeserializer.java:634)
11-10 16:30:20.784  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.deser.BeanDeserializerBase.resolve(BeanDeserializerBase.java:438)
11-10 16:30:20.784  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.deser.DeserializerCache._createAndCache2(DeserializerCache.java:298)
11-10 16:30:20.784  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.deser.DeserializerCache._createAndCacheValueDeserializer(DeserializerCache.java:247)
11-10 16:30:20.784  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.deser.DeserializerCache.findValueDeserializer(DeserializerCache.java:146)
11-10 16:30:20.784  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.DeserializationContext.findRootValueDeserializer(DeserializationContext.java:322)
11-10 16:30:20.789  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.ObjectReader._prefetchRootDeserializer(ObjectReader.java:1351)
11-10 16:30:20.789  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.ObjectReader.<init>(ObjectReader.java:186)
11-10 16:30:20.789  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.ObjectMapper.reader(ObjectMapper.java:2445)
11-10 16:30:20.789  25799-26287/com.myproject W/System.err﹕ at com.fasterxml.jackson.databind.ObjectMapper.reader(ObjectMapper.java:2455)
11-10 16:30:20.789  25799-26287/com.myproject W/System.err﹕ at com.myproject.core.downloading.downloadOperations.ItemListDownloadOperation.parseItemsArray(ItemListDownloadOperation.java:344)
11-10 16:30:20.794  25799-26287/com.myproject W/System.err﹕ at com.myproject.core.downloading.downloadOperations.ItemListDownloadOperation.parseResult(ItemListDownloadOperation.java:319)
11-10 16:30:20.794  25799-26287/com.myproject W/System.err﹕ at com.myproject.core.downloading.downloadOperations.ItemListDownloadOperation.downloadBinaryFile(ItemListDownloadOperation.java:231)
11-10 16:30:20.794  25799-26287/com.myproject W/System.err﹕ at com.myproject.core.downloading.downloadOperations.BaseDownloadOperation.simpleHTTPconnectionProcessing(BaseDownloadOperation.java:243)
11-10 16:30:20.794  25799-26287/com.myproject W/System.err﹕ at com.myproject.core.downloading.downloadOperations.BaseDownloadOperation.access$000(BaseDownloadOperation.java:38)
11-10 16:30:20.794  25799-26287/com.myproject W/System.err﹕ at com.myproject.core.downloading.downloadOperations.BaseDownloadOperation$1.run(BaseDownloadOperation.java:90)
11-10 16:30:20.829  25799-26287/com.myproject E/AndroidRuntime﹕ FATAL EXCEPTION: Thread-5068
    java.lang.IllegalAccessError: Class ref in pre-verified class resolved to unexpected implementation
            at java.lang.reflect.Field.getDeclaredAnnotations(Native Method)
            at java.lang.reflect.Field.getDeclaredAnnotations(Field.java:204)
            at com.fasterxml.jackson.databind.introspect.AnnotatedClass._constructField(AnnotatedClass.java:808)
            at com.fasterxml.jackson.databind.introspect.AnnotatedClass._findFields(AnnotatedClass.java:688)
            at com.fasterxml.jackson.databind.introspect.AnnotatedClass.resolveFields(AnnotatedClass.java:462)
            at com.fasterxml.jackson.databind.introspect.AnnotatedClass.fields(AnnotatedClass.java:274)
            at com.fasterxml.jackson.databind.introspect.POJOPropertiesCollector._addFields(POJOPropertiesCollector.java:363)
            at com.fasterxml.jackson.databind.introspect.POJOPropertiesCollector.collect(POJOPropertiesCollector.java:232)
            at com.fasterxml.jackson.databind.introspect.BasicClassIntrospector.collectProperties(BasicClassIntrospector.java:142)
            at com.fasterxml.jackson.databind.introspect.BasicClassIntrospector.forDeserialization(BasicClassIntrospector.java:81)
            at com.fasterxml.jackson.databind.introspect.BasicClassIntrospector.forDeserialization(BasicClassIntrospector.java:11)
            at com.fasterxml.jackson.databind.DeserializationConfig.introspect(DeserializationConfig.java:507)
            at com.fasterxml.jackson.databind.deser.DeserializerCache._createDeserializer(DeserializerCache.java:329)
            at com.fasterxml.jackson.databind.deser.DeserializerCache._createAndCache2(DeserializerCache.java:267)
            at com.fasterxml.jackson.databind.deser.DeserializerCache._createAndCacheValueDeserializer(DeserializerCache.java:247)
            at com.fasterxml.jackson.databind.deser.DeserializerCache.findValueDeserializer(DeserializerCache.java:146)
            at com.fasterxml.jackson.databind.DeserializationContext.findContextualValueDeserializer(DeserializationContext.java:305)
            at com.fasterxml.jackson.databind.deser.std.StdDeserializer.findDeserializer(StdDeserializer.java:634)
            at com.fasterxml.jackson.databind.deser.BeanDeserializerBase.resolve(BeanDeserializerBase.java:438)
            at com.fasterxml.jackson.databind.deser.DeserializerCache._createAndCache2(DeserializerCache.java:298)
            at com.fasterxml.jackson.databind.deser.DeserializerCache._createAndCacheValueDeserializer(DeserializerCache.java:247)
            at com.fasterxml.jackson.databind.deser.DeserializerCache.findValueDeserializer(DeserializerCache.java:146)
            at com.fasterxml.jackson.databind.DeserializationContext.findRootValueDeserializer(DeserializationContext.java:322)
            at com.fasterxml.jackson.databind.ObjectReader._prefetchRootDeserializer(ObjectReader.java:1351)
            at com.fasterxml.jackson.databind.ObjectReader.<init>(ObjectReader.java:186)
            at com.fasterxml.jackson.databind.ObjectMapper.reader(ObjectMapper.java:2445)
            at com.fasterxml.jackson.databind.ObjectMapper.reader(ObjectMapper.java:2455)
            at com.myproject.core.downloading.downloadOperations.ItemListDownloadOperation.parseItemsArray(ItemListDownloadOperation.java:344)
            at com.myproject.core.downloading.downloadOperations.ItemListDownloadOperation.parseResult(ItemListDownloadOperation.java:319)
            at com.myproject.core.downloading.downloadOperations.ItemListDownloadOperation.downloadBinaryFile(ItemListDownloadOperation.java:231)
            at com.myproject.core.downloading.downloadOperations.BaseDownloadOperation.simpleHTTPconnectionProcessing(BaseDownloadOperation.java:243)
            at com.myproject.core.downloading.downloadOperations.BaseDownloadOperation.access$000(BaseDownloadOperation.java:38)
            at com.myproject.core.downloading.downloadOperations.BaseDownloadOperation$1.run(BaseDownloadOperation.java:90)



I have added many libraries in my project and use multiDexEnabled = true in gradle. Also I added play services:

compile 'com.google.android.gms:play-services:6.1.71'

In this configuration application crashes every time it try to get annotations of some class field. It crashes when ormlite library, Jackson or my code try to get field annotations. Quick and ugly solution in this situation - change the version of play services:

compile 'com.google.android.gms:play-services:4.4.52'

With this version application run without this sort of crash. Could anyone suggest smth better??

Attaching with gdb on a KK device (Nexus 4) when the exception is about to be thrown, we get the following stack:

Breakpoint 1, dvmThrowIllegalAccessError (msg=0x416237ad "Class ref in pre-verified class resolved to unexpected implementation") at dalvik/vm/Exception.cpp:1319
1319    void dvmThrowIllegalAccessError(const char* msg) {
(gdb) bt
#0  dvmThrowIllegalAccessError (msg=0x416237ad "Class ref in pre-verified class resolved to unexpected implementation") at dalvik/vm/Exception.cpp:1319
#1  0x415f15d8 in dvmResolveClass (referrer=0x41f461a0, classIdx=1065, fromUnverifiedConstant=fromUnverifiedConstant@entry=false) at dalvik/vm/oo/Resolve.cpp:138
#2  0x415f1672 in dvmResolveStaticField (referrer=<optimized out>, sfieldIdx=2127) at dalvik/vm/oo/Resolve.cpp:463
#3  0x415f217e in processAnnotationValue (clazz=clazz@entry=0x41f461a0, pPtr=pPtr@entry=0x75dbd9e4, pValue=pValue@entry=0x75dbd9f8, resultStyle=resultStyle@entry=kAllObjects) at dalvik/vm/reflect/Annotation.cpp:463
#4  0x415f234e in createAnnotationMember (pPtr=0x75dbd9e4, annoClass=<optimized out>, clazz=0x41f461a0) at dalvik/vm/reflect/Annotation.cpp:662
#5  processEncodedAnnotation (clazz=clazz@entry=0x41f461a0, pPtr=pPtr@entry=0x75dbda34) at dalvik/vm/reflect/Annotation.cpp:790
#6  0x415f267e in processAnnotationSet (clazz=0x41f461a0, pAnnoSet=0x752f4530, visibility=1) at dalvik/vm/reflect/Annotation.cpp:865
#7  0x415ebf2a in Dalvik_java_lang_Class_getDeclaredAnnotations (args=<optimized out>, pResult=0x75021a00) at dalvik/vm/native/java_lang_Class.cpp:711
#8  0x415d4aca in dvmResolveNativeMethod (args=0x75b92d70, pResult=0x75021a00, method=0x6d4f61e8, self=0x750219f0) at dalvik/vm/Native.cpp:106
#9  0x415ac028 in dalvik_mterp () at dalvik/vm/mterp/out/InterpAsm-armv7-a-neon.S:16267
#10 0x750219f0 in ?? ()
#11 0x750219f0 in ?? ()
Backtrace stopped: previous frame identical to this frame (corrupt stack?)
(gdb)

Thanks Seb.

The stack points that processAnnotationValue is calling dvmResolveStaticField which calls "dvmResolveClass(..., ..., false)" the "false" argument in the context of an annotation value is wrong because dexopt does not treat annotation values.

This means:
1) You don't need multidex to face the problem.
2) To not face the problem we must ensure that enum referenced by runtime visible annotations are in the bootclasspath, or are in the same dex as the annotated classes.

How to ensure that visible annotations are in the same dex as the annotated classes?

So it sounds like the partitioning needs to take annotations into account?

That's what the dexMainClasses script was for, right? Our problems diminished when we used it to generate the classlist for the first dex, but the script was far from perfect and forced bad maintenance practices.

#36 The dex of the annotation definition doesn't matter, it's the dex defining the enum that matters.
The current rule is putting all annotations + their direct references into the main dex so the fix is to keep all the class annotated by this kind of annotation in the main dex. If you really need something before a fix to the rule is delivered, you'll have to handle that manually. I don't think the gradle rule already allows to specify manual contribution to the main dex classes list, so one solution would be to build the dex files directly from dx command line and add manually the annotated classes to the list. Another workaround solution would be to add direct references (for example field with declared type of the annotated class :-( ) in an Application, Activity, Service...

#37 #38 Yes, I'm working on fixing that.

#36 For a workaround dont use multiexEnabled and go with the solution described this blogs instead:

http://blog.osom.info/2014/10/multi-dex-to-rescue-from-infamous-65536.html

http://blog.osom.info/2014/10/generating-main-dex-list-file.html

@40, multiDexEnabled should do the same as manually calling mainDexClasses[.bat] and sending the output to dx.

We can actually do more optimization in Gradle, so it's better to let gradle do this.

There seems to be some issues though obviously. I'm interested if we can figure out what difference you see in the main class list using Gradle or the manual script.

At least you can manually add failing classes to the script one by one, no other difference.

That helped solving other problems like anon classes that were part of the Application class and were not being added consistently.

[Comment deleted]

[Comment deleted]

#45 This does not look to be the same kind of problem, could you please open a new bug for this? Please add in which dex the missing class can be found. You can find it by unzipping your apk to a folder and then run in the folder:

for f in `ls classes*.dex`;
do
        dexdump $f | sed -e s/^/$f:/ | grep "  Class descriptor  : " | grep "Lretrofit/Endpoints;"
done

Thank you.

#46 It is done : https://code.google.com/p/android/issues/detail?id=79826&thanks=79826&ts=1416304718
Results of the command are at the end of the report.
Thank you !

A workaround was submitted in the AOSP https://android-review.googlesource.com/#/c/115353/3

It's included in build-tools 21.1.2

Awesome! Thank you for the fix. Updating.

I tried it a few minutes ago and it seems to work.
Great job !

Shadulsikder10@gmail.com 

Same issue with Cerberus.  Rooted Nexus 5 running 4.4.4.

Same issue on LG G3 running 4.4.2. Tried uninstalling TurnOffScreen by Solo Launcher Team. Used safe mode to deactivate and uninstall.  Had to hit the Deactivate button several times (or I'm impatient and it was working in the background.  Would be nice to not have to go into safe mode though.

Same issue on Fairphone running 4.2.2. Tried to remove Where is my Droid but I can't remove it as an device admin despite toggling it multiple times.

Problem on a new tab s after removing activesync account. Restrictions remain. Please fix this ancient problem.

Please "star" this issue by clicking the star on the upper of this page, under the New Issue button. The more people that star this issue, the more likely Google is to pay attention to it.

the same Samsung s5 4.4.2
#25 helped!!

#25 helped. I rebooted countless time. maybe around 10 and finally got the app disappeared from device admin. damn this notes traveller app

[Comment deleted]

The same problem I tried #25 atleast 20 times with my LG G3 4.4.2 Kit kat, but no luck.

Unfortunately Android does not have running patch updates like windows KB file.
I am hoping LG G3 will have Android 5 ( L) update and get a patch inbuilt.

I'm having this exact same problem on android 4.4.2 with 3 different apps

It reminds me a song by Dr Bob Dylan... "how many ears must one man have
 Before he can hear people cry?"
Dear Android team, hope Android 5 will have the patch waiting for to update in LG G3.
Three or four apps never gets unclicked in phone administrator.

It took me multiple tries (sorry didn't count) booting up into safe mode to disable device administrator, this was for Lotus Notes Traveler. Very frustrating but keep having a go at it.

Doesn't obsolete imply that this issue is fixed???  I'm still having problems with this...

Just a great news. With Upgrade of LG G3 Android 5 just now, first thing I tried and could deactivate and then immediately successfully unclick the Lotus Traveler from Phone Administrator. Then uninstalled all 5 unused icons just with a click of a button of uninstall.
Truly great news, Google Guys listen to this forum. Thanks and closed from me.

Hi ALLLLLLL

Solution found for this issue..

Please visit the given link below,

http://www.resultsmala.com/cant-remove-device-administrator-fixed-android-jellybean-and-kitkat/

Excellent and working well for me...

Even the admin responds at info@tnleaks.in 

mail to him about ur problem if not cleared via the given link

Followed #25. It worked wonders!
👍 to #25. :)

Experencing the same issue for my Huawei device.

I have tried restarting device and checking if we can deactivate the admin user several times but it was of no use..

Is there any way to get out of this without updating the android?

Also one concern here..if we make the factory reset, does it will solve the problem?

Appreciate any help.

Follow #25 worked for me. Note that it is a very slow process because the error message still keeps popping up. And it took me more than 4 time repeated process and finally the Device administrators checkbox is finally unchecked. After that I can uninstall updated Google Play Service. After that it's back to working, so far.

Simply, Reboot your device in safe mode. After that you can easily revoke your device administrator prevelidge given to that rouge app which making your device somewhat malicious. And now you can uninstall that app easily

I've tried from #25 so many times but it wasn't successful. I found the video how to root my android but it didn't work too. Then I let it be for a few days and suddenly a pop-up comes out telling me to remove the application and it was successful! There's no track of that annoying apps anymore!

I have tried the SAFE MODE reboot on my Galaxy S5 and MaaS360 for Android still will not let me un-select it as a device manager.

The DEACTIVATE option is completely grayed out and I can't force stop the app via the application manager either.

Is there anything I can do short of a full factory reset?

For Samsung phones who wants to uninstall maas360...open maas360 application,hit the option button select remove control...you should be able to uninstall maas360 now...

Same here with 4.4.4 on Samsung E7....how can they do such mistakes as android is expexted as the king of accessibility....Really hope that android will b going to fix it soon & they will do it👍

I am facing the same issue i am using innjoo android note pro. A chinies application is installed in my android automatically its device administration is enbbled when i try to uncheck it promt me to deactivate the administratio  when i click on deactovate this is not workong
 

I am facing the same issue i am using innjoo android note pro. A chinies application is installed in my android automatically its device administration is enbbled when i try to uncheck it promt me to deactivate the administratio  when i click on deactovate this is not workong
 

i m facing Same problem but in different manner i cant see install app in Device administrator. how i disable it.?? above is not working...

#25 perfectly worked for me in 1 attempt.
just keep pressing deactivate in respective device administrator in safe mode many times and your problem will be solved.

friends you can use greenify app to deactivate

use an app from google play store "System app remover (ROOT)" it looks with red color install that go to 1.Menu  2.User app  select app and uninstall that app even if it cannot deactivated for me it works try it.

I found that the confirmation prompt will come up sometimes when I tap "Deactivate" in the accessibility settings and then wait a while (perhaps 5 minutes). Once the confirmation prompt shows, you can confirm and the device admin will be immediately deactivated.

Having this item in 2016 with the Greenify app. Whole entry is grayed out in device manager settings and the checkmark cannot be clicked. App cannot be uninstalled.

Had the same issue trying to deactivate Device administrator Followed Directions in number 25 Instructions Operated by Samsung Galaxy Nexus 4.2.2 in safe mode And it worked like a charm thank you very much. You have no idea how much this issue was causing me Aggravation.Now the problem is solved All issues seem to have gone away thank you again For your advice especially number 25.

I have installed Dr web security space lite and now it's not uninstalling because of the same problem of device admin not deactivating!! Plz help me I don't want to do a factory data reset!!

I'm having this issue with Norton Mobile Security. The only difference is the checkbox won't uncheck at all, and this is a big problem because Norton Security has been causing a lot of issues on my Samsung Tab 3 (7.0 model) such as slowing it down so much I can't even play apps like I used to, and not only that, I can't download apps properly from Google Play. They always stop downloading at 70% and take 15 minutes to start back up, and most of them don't even install at all! It's even causing wifi connection issues on networks with no password, which is a major problem because my school has an unsecured wifi connection.

Cool

hi,
i had an issue with one plus 2 phone, where wrox home from citix wasn't working after Oxygen OS 2.2.1 upgrade and it wont allow me to un-install wrox home either.

Worx home was shown in the device administration, couldn't un-check.

Deleted the citrix account connected with Worx home in the preferences and then it allowed me to un-install it.

Its one of the security features from citrix which prevents accidental deletion of applications.

i am still figuring out why after Oxygen OS 2.2.1 upgrade wrox mails stopped working.

I am unable to deactivate the device administrator apps although I click on disable it. Is not working.
Can u pls tell how can I do this

I cannot uninstall Bit Defender AV in /settings/applications or deactivate it in /settings/lock screen and security/other settings/phone administrators. The switch in /phone administrators does not change, then the phone administrators menu page crashes, recovers and dumps me one menu back. Deactivating the other phone administrators also did not work. None of the apps recommended in the entire threat above will uninstall Bit Defender. Bid Defender support is worthless thus far. I am on 6.0.1. Ideas.

MobileIron If you care. This is happening to your app. Please work with Google and fix.

After disabling a device administrator application from the Security > Device administrator menu, the check box doesn't clear

MobileIron bug.

Update to #87, Took 5 times of unclick and reboot. not cool.

I have the same issues with Swift WiFi. Whenever I try to remove it as a device administrator, the Settings app crashes. Can't figure out how to Uninstall Swift WiFi since it needs to be removed as device admin first. Running Android N Beta 7/5/16 update on Nexus 5X. I've already sent feedback to Google regarding this. Anyone have any ideas.

I also had problems with unchecking device administrator (German "Geräteadministratoren") for apps like "Tasker" on my Samsung Galaxy S7 (SM-G930F with Android 6.0.1).
Settings > Lock screen and security > Other security settings > Device administrators > Uncheck app > Error message: "Unfortunately, Settings has stopped" (German "Einstellungen angehalten")

I powered off the phone, powered it on and hold Volume down to boot in Safe Mode. But even in this mode I got the Error message.
Removing rights from the app didn't help (Settings > Applications > Application manager > App > Permissions/Notifications/Set as default and Settings > Applications > Application manager > MORE > Change system settings > App).

Then I tried Settings > Applications > Application manager > MORE > Reset app preferences and after this step, unchecking device administrator worked fine.
Some app settings got lost (like Widget settings, default Keyboard and Launcher), but at least I wasn't required to factory reset the whole device.

Hi. I had same problem n uninstall n deactivate option where grey .  I tried safe mode thing  it didnt worked.. I deleted downloaded file of dat app . N den install system app remover root . As my cel was not having root . So tried settings > about phone > 7 times pressing build number >  developer option > usb enable .  N  activate some other system app present in list n den deactivate n irritating app android antivirus.from my device  n application manager n den restart .  Cel back to normal .  During dis period tried many restart for my cel .

#90 worked for me with the same issues on Samsung GS6, where attempts to change the administrator status of an app crashed with Error "Unfortunately, Settings has stopped".

my problem is actually similar but the thing is i downloaded hi locker (a lockscreen app) it worked perfectly fine till today, it wont even let me go to the page where you can click deactivate. It keeps shutting down saying "Unfortunately, Settings stopped working" every time i go there. I tried doing the whole safe mode thing 10 times now and still nothing. I've been all over the internet looking for help but NOTHING ugh this is beyond annoying and I just got this phone a couple days ago...

OMG THANK YOU SOOOO MUCH #90 THIS BLESSED MY LIFE i was struggling for good 3 hours wtf thank you so much, the app is finally gone!!

#90 thank you thank you thank you

[Comment deleted]

To repeat what #87 said.
MobileIron If you care. This is happening to your app. Please work with Google and fix.

After disabling a device administrator application from the Security > Device administrator menu, the check box doesn't clear

MobileIron bug.

Unable to disable as admin or uninstall. I am really upset that a complete stranger who creates an app has more control over my phone than I do. WTH?
Fix this!

#90 worked for me. Thank you soooooo much! I have been googling about this for 3 days already :)

[Comment deleted]

A HUGE THANK YOU #90. Greenify. This worked. Only thing after reading and trying for 3 days. THANK YOU

i need help. i download ac display and cant deactivate it even throught phone administrator. please help

I tried it... but Was not able to disable the app ... It just locks the screen... App named ANTIVIRUS_PRO it suddenly arrived as ur phone s affected in browser
 while trying to close that window it came up n installed in my device...

me too facing this problem.I m trying to deactivate an app which has malware but it is not happening....it makes my device slow.

why isnt google doing anything about it??

On Apr 16, 2017 12:03 AM, <buganizer-system@google.com> wrote:

Hallelujah #26 worked!  It took about 20 or so times!  Was about to stop trying, but didn't.  Stay with it... it eventually worked for me.  Had a problem trying to uninstall old version of Webroot Mobile.  Updated version would not activate until old version was uninstalled.  Could not uncheck it from Device Administrators to uninstall.  Running KitKat 4.4.4.

Thank You!!!

I don't know what you are talking about...sorry!

On Tue, Jan 1, 2019, 2:20 PM <buganizer-system@google.com> wrote: