ID |
Status |
Summary |
63
|
Accepted |
bootstrap runs need more file removal.
Type-Defect
Priority-Medium
|
62
|
Accepted |
plotCovariates discloses a bug in package 'reshape'
Type-Defect
Priority-Medium
|
61
|
Fixed |
dataSynthesis miscalculates path to parameter file
Type-Defect
Priority-Medium
|
60
|
Fixed |
checkrunno in runNonmem is nonselective
Type-Defect
Priority-Medium
|
59
|
Fixed |
simpar can throw a warning if rows are dropped
Type-Enhancement
Priority-Medium
|
58
|
Fixed |
simpar output needs more informative names for variability elements
Type-Enhancement
Priority-Medium
|
57
|
Fixed |
write.nmcontrol should recognize an 80 column limit
Type-Enhancement
Priority-Medium
|
56
|
Fixed |
omegacor should use NM7 output
Type-Enhancement
Priority-Medium
|
55
|
Fixed |
gradient and parameter searches in PLOTR could have more informative labels.
Type-Enhancement
Priority-Medium
|
54
|
Fixed |
gradient search in PLOTR could use horizontal reference
Type-Enhancement
Priority-Medium
|
53
|
Fixed |
need better covariates example
Type-Enhancement
Priority-Medium
|
52
|
Fixed |
read and write nonmem control streams
Type-Enhancement
Priority-Medium
|
51
|
WontFix |
at, before, and after can have defaults for 'where'
Type-Enhancement
Priority-Medium
|
50
|
Fixed |
seed argument to resample.data.frame is of dubious value
Type-Enhancement
Priority-Medium
|
49
|
Fixed |
Lattice and MASS can move from Suggests to Depends
Type-Enhancement
Priority-Medium
|
48
|
Fixed |
need fuller simpar example
Type-Enhancement
Priority-Medium
|
47
|
Fixed |
Plots that fail for other reasons return errors from dataSynthesis.
Type-Enhancement
Priority-Medium
|
46
|
Fixed |
need plot of gradients
Type-Enhancement
Priority-Medium
|
45
|
Fixed |
Need better error trapping for getTabs and getCovs
Type-Defect
Priority-Medium
|
44
|
Fixed |
rlog problem with NM7 runs
Type-Defect
Priority-Medium
|
43
|
Fixed |
need function to calculate correlations from nonmem output
Type-Enhancement
Priority-Medium
|
42
|
Fixed |
function to eliminate tails of distributions of parameters
Type-Enhancement
Priority-Medium
|
41
|
Fixed |
rlog disables queued runs
Type-Defect
Priority-Medium
|
40
|
Fixed |
simpar reports "sigma not positive definite" when in fact covar is not positive definite.
Type-Defect
Priority-Medium
|
39
|
Fixed |
as.unilog.pxml allows prse to be negative
Type-Defect
Priority-Medium
|
38
|
Fixed |
simpar fails with error if nsim=1.
Type-Defect
Priority-Medium
|
37
|
WontFix |
miDateTime operation may lose class
Type-Defect
Priority-Medium
|
36
|
Fixed |
runlog files are sorted lexically.
Type-Defect
Priority-Medium
|
35
|
Fixed |
dataSynthesis() looks for par.list and eta.list items in the 'covariate' data set.
Type-Defect
Priority-Medium
|
34
|
Fixed |
rlog seems not to create CombRunLog.csv where tool=nm6.
Type-Defect
Priority-Medium
|
33
|
Duplicate |
rlog deletes files for runs in progress.
Type-Defect
Priority-Medium
|
32
|
Fixed |
rlog deletes files for runs in progress.
Type-Defect
Priority-Medium
|
31
|
Fixed |
Need mechanism for auto-summary of comment categories.
Type-Enhancement
Priority-Medium
|
30
|
Fixed |
simpar failes if only one omega or sigma
Type-Defect
Priority-High
|
29
|
Fixed |
accept() should call install.packages with type='source'.
Type-Enhancement
Priority-Medium
|
28
|
Fixed |
data set name and plotting
Type-Enhancement
Priority-Medium
|
27
|
Fixed |
NONR stops without warning
Type-Defect
Priority-High
|
26
|
WontFix |
MIfuns_3[1].2.15 installation issue
Type-Defect
Priority-Medium
|
25
|
Verified |
Bootstrap runs do not generate a run log for NM7.
Type-Enhancement
Priority-Medium
|
24
|
Fixed |
clean-up of run directory occurs after compile only
Type-Defect
Priority-Medium
|
23
|
WontFix |
If compile fails, execute should also fail without job going into pending SGE queue
Type-Defect
Priority-Medium
|
22
|
Fixed |
NONR help needs to discuss low-level args of interest to typical user.
Type-Defect
Priority-Medium
|
21
|
Fixed |
Need substitute for INFN runlog algorithm when using NONMEM7
Type-Defect
Priority-Medium
|
20
|
WontFix |
PLOTR needs to handle new RES names for NONMEM7
Type-Defect
Priority-Medium
|
19
|
Fixed |
compute.cwres should be ignored for NONMEM7
Type-Defect
Priority-Medium
|
18
|
Fixed |
drop TABR
Type-Defect
Priority-Medium
|
17
|
Fixed |
aggregate.keyed does not handle a data.frame with 'variable' column.
Type-Defect
Priority-Medium
|
16
|
Fixed |
metaSub.filename may create error for metaSub.character.
Type-Defect
Priority-Medium
|
15
|
WontFix |
merge.nm calls as.nm, which may compromise intentional departures from an as.nm() result.
Type-Defect
Priority-Medium
|
14
|
Fixed |
ComputePredictiveCheck does not correctly ignore "C" (commented rows) plus other issues
Type-Defect
Priority-Medium
|
13
|
Fixed |
nochecksum option is ignored on Mac
Type-Defect
Priority-Medium
|
12
|
Fixed |
panel.densitystrip does not respect 'col' argument
Type-Defect
Priority-Medium
|
11
|
Fixed |
panel.covplot does not propagate 'fill' consistently
Type-Defect
Priority-Medium
|
10
|
Fixed |
use PK or PD example for panel.densitystrip
Type-Enhancement
Priority-Medium
|
9
|
WontFix |
onefile and plotName usage allow old diagnostic plots to remain
Type-Defect
Priority-Medium
|
8
|
Verified |
comment char/string in hash could be an argument.
Type-Enhancement
Priority-Medium
|
7
|
Verified |
runmsge has incorrect regular expressions
Type-Defect
Priority-Medium
|
6
|
Verified |
PLOTR does not accept a user defined epilog plot
Type-Defect
Priority-Medium
|
5
|
Verified |
Enhancement of resample to allow input and output of more than just *.csv files
Type-Enhancement
Priority-Low
|
4
|
Verified |
literal * not available in metaSub replacement
Type-Defect
Priority-Medium
|
3
|
Verified |
NONR does not remove empty directories on Windows.
Type-Defect
Priority-Medium
|
1
|
Verified |
resample.data.frame should check for valid 'key' argument.
Type-Defect
Priority-Medium
|