Last 30 days

• Dec 11, 2009

  r547 (Tweaking test that avoids duplicate stack traces to be speci...) committed by jon.clayden   -   Tweaking test that avoids duplicate stack traces to be specific to cases where output() called stop()

  Tweaking test that avoids duplicate stack traces to be specific to cases where output() called stop()
• Dec 07, 2009

  r546 (Reverting r545) committed by jon.clayden   -   Reverting r545

  Reverting r545
• Dec 07, 2009

  r545 (Adding TempDirectory option to pnt-data: this is a commit fo...) committed by jon.clayden   -   Adding TempDirectory option to pnt-data: this is a commit for posterity and will be immediately reverted

  Adding TempDirectory option to pnt-data: this is a commit for posterity and will be immediately reverted
• Dec 01, 2009

  Changelog (Summary of changes in released versions of the software) Wiki page edited by jon.clayden   -   Revision r544 Edited wiki page through web user interface.

  Revision r544 Edited wiki page through web user interface.

Earlier this year

• Nov 24, 2009

  r543 (Updated dicomread/dicomsort test in line with changes to dic...) committed by jon.clayden   -   Updated dicomread/dicomsort test in line with changes to dicomsort output

  Updated dicomread/dicomsort test in line with changes to dicomsort output
• Nov 18, 2009

  tractor-1.3.0.zip (TractoR version 1.3.0 (zipped)) file uploaded by jon.clayden   -  

  Labels: Featured Type-Archive

  Labels: Featured Type-Archive
• Nov 17, 2009

  r542 (Including series descriptions in subdirectories created by t...) committed by jon.clayden   -   Including series descriptions in subdirectories created by the dicomsort expt

  Including series descriptions in subdirectories created by the dicomsort expt
• Nov 16, 2009

  ScriptGroups (A categorised list of scripts available in TractoR) Wiki page edited by jon.clayden   -   Revision r541 Edited wiki page through web user interface.

  Revision r541 Edited wiki page through web user interface.
• Nov 16, 2009

  ScriptGroups (A categorised list of scripts available in TractoR) Wiki page edited by jon.clayden   -   Revision r540 Edited wiki page through web user interface.

  Revision r540 Edited wiki page through web user interface.
• Nov 16, 2009

  ScriptGroups (A list of) Wiki page added by jon.clayden   -   Revision r539 Created wiki page through web user interface.

  Revision r539 Created wiki page through web user interface.
• Nov 16, 2009

  r538 (Adding WindowLimits option to proj and slice scripts) committed by jon.clayden   -   Adding WindowLimits option to proj and slice scripts

  Adding WindowLimits option to proj and slice scripts
• Nov 13, 2009

  PNTTutorial (Guide to the probabilistic neighbourhood tractography script...) Wiki page edited by jon.clayden   -   Revision r537 Updated instructions for pnt-eval in 1.3

  Revision r537 Updated instructions for pnt-eval in 1.3
• Nov 13, 2009

  r536 (Allowing for 3D DICOM files which are not Siemens mosaic and...) committed by jon.clayden   -   Allowing for 3D DICOM files which are not Siemens mosaic and/or are resampled after acquisition

  Allowing for 3D DICOM files which are not Siemens mosaic and/or are resampled after acquisition
• Nov 13, 2009

  r535 (Keeping tags from inside sequences the first time they are s...) committed by jon.clayden   -   Keeping tags from inside sequences the first time they are seen (and warning if they are seen again)

  Keeping tags from inside sequences the first time they are seen (and warning if they are seen again)
• Nov 11, 2009

  r534 (Calling capabilities() more specifically to avoid starting X...) committed by jon.clayden   -   Calling capabilities() more specifically to avoid starting X11 needlessly

  Calling capabilities() more specifically to avoid starting X11 needlessly
• Nov 11, 2009

  r533 (Handling sequences of indeterminate length in DICOM metadata...) committed by jon.clayden   -   Handling sequences of indeterminate length in DICOM metadata (to date only seen in Philips data)

  Handling sequences of indeterminate length in DICOM metadata (to date only seen in Philips data)
• Nov 10, 2009

  PNTTutorial (Guide to the probabilistic neighbourhood tractography script...) Wiki page edited by jon.clayden   -   Revision r532 Added pnt-prune related documentation

  Revision r532 Added pnt-prune related documentation
• Nov 10, 2009

  GettingStarted (Installation and basic use of TractoR) Wiki page edited by jon.clayden   -   Revision r531 Edited wiki page through web user interface.

  Revision r531 Edited wiki page through web user interface.
• Nov 10, 2009

  GettingStarted (Installation and basic use of TractoR) Wiki page edited by jon.clayden   -   Revision r530 Edited wiki page through web user interface.

  Revision r530 Edited wiki page through web user interface.
• Nov 10, 2009

  tractor-1.3.0.tar.gz (TractoR version 1.3.0) file uploaded by jon.clayden   -  

  Labels: Type-Archive Featured

  Labels: Type-Archive Featured
• Nov 10, 2009

  Changelog (Summary of changes in released versions of the software) Wiki page edited by jon.clayden   -   Revision r529 Adding changelog for v1.3.0

  Revision r529 Adding changelog for v1.3.0
• Nov 10, 2009

  r528 (Creating 1.3 branch) committed by jon.clayden   -   Creating 1.3 branch

  Creating 1.3 branch
• Nov 10, 2009

  r527 (Tagging version 1.3.0) committed by jon.clayden   -   Tagging version 1.3.0

  Tagging version 1.3.0
• Nov 10, 2009

  r526 (Bumping version numbers for TractoR v1.3.0) committed by jon.clayden   -   Bumping version numbers for TractoR v1.3.0

  Bumping version numbers for TractoR v1.3.0
• Nov 09, 2009

  r525 (Calculating (rather than assuming) streamline set point spac...) committed by jon.clayden   -   Calculating (rather than assuming) streamline set point spacing in newStreamlineSetTractByTruncationToReference function

  Calculating (rather than assuming) streamline set point spacing in newStreamlineSetTractByTruncationToReference function
• Nov 09, 2009

  r524 (Modifying chfiletype expt to work with multiple files) committed by jon.clayden   -   Modifying chfiletype expt to work with multiple files

  Modifying chfiletype expt to work with multiple files
• Nov 05, 2009

  r523 (Fixing type error which would make extract expt fail with Ov...) committed by jon.clayden   -   Fixing type error which would make extract expt fail with OverlayOnBrain:false

  Fixing type error which would make extract expt fail with OverlayOnBrain:false
• Nov 05, 2009

  Preprocessing (Initial steps required to prepare a data set for use with Tr...) Wiki page edited by jon.clayden   -   Revision r522 Edited wiki page through web user interface.

  Revision r522 Edited wiki page through web user interface.
• Nov 01, 2009

  r521 (Getting the same prune results on different platforms is tri...) committed by jon.clayden   -   Getting the same prune results on different platforms is tricky, so dropping test to a basic "no errors" one

  Getting the same prune results on different platforms is tricky, so dropping test to a basic "no errors" one
• Oct 29, 2009

  r520 (Adding supporting functions for pnt-prune expt) committed by jon.clayden   -   Adding supporting functions for pnt-prune expt

  Adding supporting functions for pnt-prune expt
• Oct 28, 2009

  r519 (Added pnt-prune expt and test) committed by jon.clayden   -   Added pnt-prune expt and test

  Added pnt-prune expt and test
• Oct 26, 2009

  r518 (Another typo fix; converted one flag() call to output()) committed by jon.clayden   -   Another typo fix; converted one flag() call to output()

  Another typo fix; converted one flag() call to output()
• Oct 26, 2009

  r517 (Typo fix) committed by jon.clayden   -   Typo fix

  Typo fix
• Oct 26, 2009

  r516 (Update to DICOM code to avoid misinterpreting non-Siemens im...) committed by jon.clayden   -   Update to DICOM code to avoid misinterpreting non-Siemens images as mosaic images due to zero- filling or similar

  Update to DICOM code to avoid misinterpreting non-Siemens images as mosaic images due to zero- filling or similar
• Oct 23, 2009

  r515 (Updating test output following message level downgrades in D...) committed by jon.clayden   -   Updating test output following message level downgrades in DICOM code

  Updating test output following message level downgrades in DICOM code
• Oct 23, 2009

  r514 (Avoiding repeated stack traces by ignoring those ending with...) committed by jon.clayden   -   Avoiding repeated stack traces by ignoring those ending with a call to stop()

  Avoiding repeated stack traces by ignoring those ending with a call to stop()
• Oct 14, 2009

  r513 (Updating R documentation to match changes to viz function pa...) committed by jon.clayden   -   Updating R documentation to match changes to viz function parameters

  Updating R documentation to match changes to viz function parameters
• Oct 14, 2009

  r512 (Removed one warning and downgraded two to Info level in DICO...) committed by jon.clayden   -   Removed one warning and downgraded two to Info level in DICOM code, because they do not really represent problems

  Removed one warning and downgraded two to Info level in DICOM code, because they do not really represent problems
• Oct 12, 2009

  r511 (Tweaks to avoid problems with rounding and inconsistent knot...) committed by jon.clayden   -   Tweaks to avoid problems with rounding and inconsistent knot spacing

  Tweaks to avoid problems with rounding and inconsistent knot spacing
• Oct 11, 2009

  r510 (Tweaking test descriptions for consistency) committed by jon.clayden   -   Tweaking test descriptions for consistency

  Tweaking test descriptions for consistency
• Oct 11, 2009

  r509 (Updating tests to use saved data) committed by jon.clayden   -   Updating tests to use saved data

  Updating tests to use saved data
• Oct 11, 2009

  r508 (Updating Makefile to be more discriminating when clearing up...) committed by jon.clayden   -   Updating Makefile to be more discriminating when clearing up .Rdata files

  Updating Makefile to be more discriminating when clearing up .Rdata files
• Oct 11, 2009

  r507 (Adding data for PNT tests, saved to avoid random number issu...) committed by jon.clayden   -   Adding data for PNT tests, saved to avoid random number issues during testing

  Adding data for PNT tests, saved to avoid random number issues during testing
• Oct 02, 2009

  r506 (Setting ignore prop on tests/tmp) committed by jon.clayden   -   Setting ignore prop on tests/tmp

  Setting ignore prop on tests/tmp
• Oct 02, 2009

  r505 (Adjusting pnt-eval test in line with changes to pnt-eval scr...) committed by jon.clayden   -   Adjusting pnt-eval test in line with changes to pnt-eval script itself (test now works); adding pnt- em test

  Adjusting pnt-eval test in line with changes to pnt-eval script itself (test now works); adding pnt- em test
• Oct 02, 2009

  r504 (Allowing PNT model names to be specified directly - this is ...) committed by jon.clayden   -   Allowing PNT model names to be specified directly - this is needed by pnt-eval, which cannot use data set based naming (since two data sets are needed in this use case)

  Allowing PNT model names to be specified directly - this is needed by pnt-eval, which cannot use data set based naming (since two data sets are needed in this use case)
• Sep 28, 2009

  r503 (Adding PNT tests (but there is an issue with pnt-eval at the...) committed by jon.clayden   -   Adding PNT tests (but there is an issue with pnt-eval at the moment)

  Adding PNT tests (but there is an issue with pnt-eval at the moment)
• Sep 28, 2009

  r502 (Setting ignore prop on fdt.track dir) committed by jon.clayden   -   Setting ignore prop on fdt.track dir

  Setting ignore prop on fdt.track dir
• Sep 28, 2009

  r501 (Setting ignore prop on Camino, HNT and PNT test dirs) committed by jon.clayden   -   Setting ignore prop on Camino, HNT and PNT test dirs

  Setting ignore prop on Camino, HNT and PNT test dirs
• Sep 28, 2009

  r500 (Correction to r498) committed by jon.clayden   -   Correction to r498

  Correction to r498