pyPopGen is a library to do Population Genetics (and Genomics) in Python.

Although the library implements certain key concepts in population genetics (e.g. Fst statistics) it strives to use and facilitate the use of existing programs. It allows to use programs like Genepop, Arlequin, fdist2, Simcoal2, ... By usage we mean a mix of preparing input files, parsing output formats, using webservices, and offering new functionality on top of existing programs (e.g. easy creation of demographies for use with Coalescent simulators).

All the code from this project is being integrated in the Biopython project. For new developments please go there.