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Solution 2 has been implemented, see issue #102 . OWLGraphEdge now has gci_relation and gci_filler attributes. OWLGraphWrapperEdgesExtended implements many methods reproducing behavior of OWLGraphWrapperEdges methods, but taking into account GCI relations. The ticket might be closed.
From cmung...@gmail.com on January 24, 2013 17:15:48
OWLGraphView provides a graph view of an ontology, with edges formed by axioms such as
X SubClassOf R Some Y
==>
Ontologies such as Uberon have taxon-specific relationships which have OWL semantics
(X and part_of some Taxon) SubClassOf R some Y
these are "invisible" in the graph view, as the subject is not a named class.
Some options:
{{{
Taxon X
^ /
| /
[p] [i]
| /
NewClass---[R]-->Y
}}}
Fold the GCI conditions into the edge label. E.g.
X---[R,Taxon]---->Y
This is potentially dangerous, so it would be done only if the API user asks for this.
Any other options?
[Reported by Frederic Bastian]
Original issue: http://code.google.com/p/owltools/issues/detail?id=45
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