This page is under construction and subject to significant revision.
Using the GBIF Infrastructure to Develop and Use a Regional Species Checklist
General Process
Identify data sources that contribute to building a regional species lists.
- Occurrence data identifying species reported within a country territorial.
- Type specimen occurrences
- Domain knowledge to weed outliers/false positives
- Publications
- Geo-references in data sources
- Taxonomic checklists with locality data
Identify workflow processes to
- Resolve the name to a authoritative taxonomic or nomenclatural usage
- Access resolved metadata and data and transfer to local data store
- Collate the transferred data into a new taxonomic synthesis
- Integrate data streams from multiple sources
- Publish the synthesized regional checklist to DwC Archive
Processing Occurrence Data for Regional Checklist information
- An application allows a user to circumscribe the region of interest in the Global Data Portal.
- GBIF data portal web service calls filter on region, basis of record, etc. Sufficient to distingush Type data from generalised Speciemen and Observation data.
- User reviews type information.
- User selects records for integration with the checklist process
- Checklist records are accessed and transferred to a local data store. Source metadata is also included.
- Specimen GUIDS would be preferred mechanism for a persistent link to the specimen
- User reviews a summarised view of non-type specimen data. Various views provide useful criteria for selection.
- Similar selection interfaces allow specimen data to be integrated into workflow
Goal: Specimen data is incorporated into the proto-regional checklist. Priority is given to types. Subsequent processes perform validation and cross-reference to taxon concept data in Checklist Bank.
Cross-Reference to Checklist Bank via Client Applications using API
- An application allows a user to identify Checklist Bank resources based on a region of interest (Country)
- Regional Information in Metadata identifies the highest priority set of resources (regional flora and faunas0
- Data record locality data provides a secondary set of potential taxa of interest
- Interfaces allow taxon concepts to be incorporated into the application, resolving the metadata and data into a local store.
Goal: GUID based links to authoritative and defined taxon concepts from a derived secondary checklist.
Processing External Web sources
Example: Aluka
Geo-spatially annotated Checklists not in Checklist Bank
- Taxon Tagger Applications
Metadata
Data
Using the Spatial Data Repository
SANBI PRECIS might make a good example.