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Data sources applicable for workshop
Updated Sep 8, 2009 by dprem...@gmail.com

This page is under construction and subject to significant revision.

Repository

For the workshop: Please make use of the Darwin Core data converter at GBIF to create and store Darwin Core archives. See ChecklistFormat, especially the best practices, for details if you want to create them yourself, the simplest form being a CSV file with a header row specifying the dwc term. You can upload zipped tab delimited files up to 100MB to the converter for processing. If you need a manager account, please inform Markus or Tim.

Sources loaded into Checklist Bank for Nomina V

Source Responsible In possession? Format Records  In CB
Interim Register of Marine and Non-marine Genera (IRMNG) Markus Y DwC-A pending pending
Distinct classifications from occurrence data Tim Y Mysql DB + DwC-A ??? N
WoRMS Markus Y MDB -> CSV -> DwC-A 286.595 Y
BirdLife (annotated Sibley&Munroe) Tim N ? DwC-A ??? N
Catalogue of Life 2009 Mike (Markus&Tim) Y Mysql -> DwC-A 2.171.280 Y
Fauna Europaea Markus & Dave R Y CSV -> DwC-A 282.230 Y
Euro + Med Markus Y MDB -> CSV -> DwC-A 39.308 Y
International Plant Names Index Dave R Y DwC-A 1.587.315 Y
Index Fungorum Dave R & Mike Y CSV -> DwC-A 443.311 N
Index of Organism Names Dave R Y CSV -> DwC-A (non public) 4.128.172+3.551 Y
Triton Dave R N ??? N
Integrated Taxonomic Information System (ITIS) Mike Y SQL -> MySql -> DwC-A ??? N
NCBI Taxonomy Mike Y CSV -> DwC-A 523.530 N
Germplasm Resources Information Network (GRIN) Mike Y dBASE -> CSV -> DwC-A 94.407 N
USDA Plants Mike Y CSV -> DwC-A 90.610 Y
TOL Mike Y XML -> DwC-A 1.196 N
IUCN Redlist of Threatened and Endangered Plants Markus Y XLS -> DwC-A 26.849 Y
GermanSL 1.1 Markus Y XLS -> DwC-A 29.726 Y
IRMNG all Y MySQL -> DwC-A 1.862.000 Y
Paleo (PBDB) Mike Y CSV -> MySQL -> DwC-A 113.000 Y

Index Fungorum (nomenclator) and Species Fungorum (taxonomy) are two different things.

(2) ERMS is contained within WoRMS. For the merging WoRMS would suffice since we don't require the regional context that would warrant a second ERMS.


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