issue 1
(Parser segfault) commented on by alfalf
- At first, we apologize for inconveniences to you. GBParsy does not support parsing
of some location descriptors yet. Thus, please use 'gbwithparts' file instead
of 'gb' file. Additionally, we are developing new version of GBParsy which can parse
the location descriptors.
At first, we apologize for inconveniences to you. GBParsy does not support parsing
of some location descriptors yet. Thus, please use 'gbwithparts' file instead
of 'gb' file. Additionally, we are developing new version of GBParsy which can parse
the location descriptors.
Mar 03, 2009
issue 1
(Parser segfault) reported by akborder
- What steps will reproduce the problem?
The parser segfaults whenever it encounters a feature like the following:
promoter <1..(1579.1736)
gdb says:
Program received signal SIGSEGV, Segmentation fault.
0x00007fa17f541265 in parseLocation (sLocation=<value optimized out>,
pFeature=0x28e3c40) at gbfp.c:402
402 pFeature->lEnd = ((pFeature->ptLocation)+(iLocationNum - 1))->lEnd;
What version of the product are you using? On what operating system?
gbfp 0.6.1
linux amd64
Please provide any additional information below.
Found the error while parsing the RefSeq record for NM_006517.
What steps will reproduce the problem?
The parser segfaults whenever it encounters a feature like the following:
promoter <1..(1579.1736)
gdb says:
Program received signal SIGSEGV, Segmentation fault.
0x00007fa17f541265 in parseLocation (sLocation=<value optimized out>,
pFeature=0x28e3c40) at gbfp.c:402
402 pFeature->lEnd = ((pFeature->ptLocation)+(iLocationNum - 1))->lEnd;
What version of the product are you using? On what operating system?
gbfp 0.6.1
linux amd64
Please provide any additional information below.
Found the error while parsing the RefSeq record for NM_006517.
Older
Jul 26, 2008
C_Example
(Example for the GBparsy) Wiki page edited by alfalf
