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Updated Jun 15, 2009 by NickIsConfused
OBOTools  
A set of tools to aid OBO editors

OBO Tools

Description

A set of extensions to Protege that make it easier for OBO ontology developers to find their way around and edit OBO ontologies in OWL.

In the OBO2OWL translation obsoleted terms have no parents and are marked with an annotation to say that they have been deprecated. This means they can get in the way when tools don't take them into account.

Features

Several views have been implemented:

OBO Class Hierarchy View

This display is exactly like the asserted class hierarchy, but with obsoleted root terms removed to make the remaining hierarchy clearer.

OBO Obsolete terms View

A view for listing the obsolete terms separately from the rest of the hierarchy.

Screenshots

Find the plugin

Find them under the View | Class views menu

Download

download

Author

Nick Drummond, The University of Manchester

License

LGPL


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