My favorites
|
Sign in
bpbio
simple bioinformatics scripts
Project Home
Downloads
Wiki
Issues
Source
Checkout
|
Browse
|
Changes
|
229 - 205 of 229
Older
›
Committed Changes
Rev
Scores
Commit log message
Date
Author
r229
more work on the meta.
Yesterday (26 hours ago)
bpederse
r228
write an order file when using the -o option.
Yesterday (27 hours ago)
bpederse
r227
let evalue_adjust.py take "-" to indicate the the file is from stdin.
Yesterday (27 hours ago)
bpederse
r226
fix cases where it didn't find the meta diag. add evalue adjust as a callable from the commandline.
Yesterday (27 hours ago)
bpederse
r225
exit() if they dont send in an action.
Yesterday (27 hours ago)
bpederse
r224
make plot_dag callable from the commandline.
Yesterday (27 hours ago)
bpederse
r223
put some more dag tools in one spot. make setup.py install a command-line script that dispatches to from_blast and plot_dag.py
Yesterday (27 hours ago)
bpederse
r222
update docs a bit.
Yesterday (28 hours ago)
bpederse
r221
add ability to send in a dag file where the start / stops are relative positions.
Yesterday (28 hours ago)
bpederse
r220
use full path when writing svnversion.
Yesterday (31 hours ago)
bpederse
r219
add option to specify path of h5 used.
Yesterday (31 hours ago)
bpederse
r218
when running the script, also output a file containing the version number.
Dec 21 (2 days ago)
bpederse
r217
allow ignoring local duplicates on same chromosomes. alow plotting points (much faster).
Dec 20 (2 days ago)
bpederse
r216
add the plot dag tool. needs work, but good for quick viewing.
Dec 20 (2 days ago)
bpederse
r215
work on dagchainer meta merging.
Dec 20 (2 days ago)
bpederse
r214
add a new script. evalue_adjust.py that seems to fix a lot of problems with dagchainer.
Dec 18 (4 days ago)
bpederse
r213
make a simpler header.
Dec 17 (5 days ago)
bpederse
r212
make the buffer bigger. jeez.
Dec 17 (5 days ago)
bpederse
r211
add try/execpt for multi/processing
Dec 17 (5 days ago)
bpederse
r210
remove stderr timings
Dec 17 (5 days ago)
bpederse
r209
simplify the stuff sent back from c to python.
Dec 17 (5 days ago)
bpederse
r208
add a cython module to parse the dag lines into objects. parallelize the calls to dagchainer reverse and forward.
Dec 17 (6 days ago)
bpederse
r207
cleanup add a bit of python stuff to the makefile for now.
Dec 17 (6 days ago)
bpederse
r206
fix off by one error. document a bit better.
Dec 17 (6 days ago)
bpederse
r205
work on meta stuff.
Dec 16 (6 days ago)
bpederse
229 - 205 of 229
Older
›
Hosted by