Changes - bpbio - Project Hosting on Google Code

229 - 205 of 229 Older ›

Committed Changes

Rev	Commit log message	Date	Author
r229	more work on the meta.	Yesterday (26 hours ago)	bpederse
r228	write an order file when using the -o option.	Yesterday (27 hours ago)	bpederse
r227	let evalue_adjust.py take "-" to indicate the the file is from stdin.	Yesterday (27 hours ago)	bpederse
r226	fix cases where it didn't find the meta diag. add evalue adjust as a callable from the commandline.	Yesterday (27 hours ago)	bpederse
r225	exit() if they dont send in an action.	Yesterday (27 hours ago)	bpederse
r224	make plot_dag callable from the commandline.	Yesterday (27 hours ago)	bpederse
r223	put some more dag tools in one spot. make setup.py install a command-line script that dispatches to from_blast and plot_dag.py	Yesterday (27 hours ago)	bpederse
r222	update docs a bit.	Yesterday (28 hours ago)	bpederse
r221	add ability to send in a dag file where the start / stops are relative positions.	Yesterday (28 hours ago)	bpederse
r220	use full path when writing svnversion.	Yesterday (31 hours ago)	bpederse
r219	add option to specify path of h5 used.	Yesterday (31 hours ago)	bpederse
r218	when running the script, also output a file containing the version number.	Dec 21 (2 days ago)	bpederse
r217	allow ignoring local duplicates on same chromosomes. alow plotting points (much faster).	Dec 20 (2 days ago)	bpederse
r216	add the plot dag tool. needs work, but good for quick viewing.	Dec 20 (2 days ago)	bpederse
r215	work on dagchainer meta merging.	Dec 20 (2 days ago)	bpederse
r214	add a new script. evalue_adjust.py that seems to fix a lot of problems with dagchainer.	Dec 18 (4 days ago)	bpederse
r213	make a simpler header.	Dec 17 (5 days ago)	bpederse
r212	make the buffer bigger. jeez.	Dec 17 (5 days ago)	bpederse
r211	add try/execpt for multi/processing	Dec 17 (5 days ago)	bpederse
r210	remove stderr timings	Dec 17 (5 days ago)	bpederse
r209	simplify the stuff sent back from c to python.	Dec 17 (5 days ago)	bpederse
r208	add a cython module to parse the dag lines into objects. parallelize the calls to dagchainer reverse and forward.	Dec 17 (6 days ago)	bpederse
r207	cleanup add a bit of python stuff to the makefile for now.	Dec 17 (6 days ago)	bpederse
r206	fix off by one error. document a bit better.	Dec 17 (6 days ago)	bpederse
r205	work on meta stuff.	Dec 16 (6 days ago)	bpederse

229 - 205 of 229 Older ›