bedtools

bedtools: a flexible suite of utilities for comparing genomic features.

The Google Code downloads facility is shutting down.

Therefore, bedtools will now be hosted on Github at the following URL: https://github.com/arq5x/bedtools2

Stable releases, including the new (December 13, 2013) 2.18.releases can be found here: https://github.com/arq5x/bedtools2/releases

Project Information

  • License: GNU GPL v2
  • 115 stars
  • svn-based source control

Labels:
bioinformatics genomics bed sam bam overlap features sequencing intersect coverage gff vcf bedgraph intervals genomearithmetic