[http://dadi.googlecode.com/svn/wiki/dadi_logo.png] =Diffusion Approximation for Demographic Inference= ∂a∂i implements a method for demographic inference from genetic data, based on a diffusion approximation to the allele frequency spectrum. One of ∂a∂i's main benefits is speed: fitting a two-p...

==Introduction== PopABC is a computer package to estimate historical demographic parameters of closely related species/populations (e.g. population size, migration rate, mutation rate, recombination rate, splitting events) within a Isolation with migration model. The software performs coalescent si...

Inference of recent migration using multilocus genetic markers

Mendel's Accountant is a numerical accounting program to track genetic change over time. This is a user-friendly program which models the accumulation over time of mutations within a population - as it is affected by numerous biological parameters.

combines *PGEToolbox* (http://www.bioinformatics.org/pgetoolbox/) and *MBEToolbox* (http://www.bioinformatics.org/mbetoolbox/)

pyPopGen is a library to do Population Genetics (and Genomics) in Python. Although the library implements certain key concepts in population genetics (e.g. Fst statistics) it strives to use and facilitate the use of existing programs. It allows to use programs like Genepop, Arlequin, fdist2, Simc...

VariScan is a software package for the analysis of DNA sequence polymorphisms at the whole genome scale. Among other features, the software: (1) can conduct many population genetic analyses; (2) incorporates a multiresolution wavelet transform-based method that allows capturing relevant informatio...

Testing for selection is becoming one of the most important steps in the analysis of multilocus population genetics data sets. LOSITAN is a selection detection workbench based on the fdist Fst-outlier method. LOSITAN greatly facilitates correct approximation of model parameters (e.g., genome-wid...