== Summary == Versatile Object-oriented Toolkit for Coarse-graining Applications (VOTCA) is a package intended to reduce the amount of routine work when doing systematic coarse-graining of various systems. It has interfaces to kinetic Monte Carlo code to simulate charge dynamics in disordered semic...

= Welcome to ACPYPI! = A tool based on Python to use *Antechamber* to generate topologies for chemical compounds and to interface with others python applications like [http://www.ccpn.ac.uk CCPN] tools or [http://aria.pasteur.fr ARIA]. *acpypi* is pronounced as "_ace + pipe_". Topologies fi...

*MDAnalysis* is a python framework to analyze molecular dynamics trajectories generated by [http://www.charmm.org/ Charmm], [http://www.ks.uiuc.edu/Research/namd/ NAMD], or [http://lammps.sandia.gov/ LAMMPS] ([http://www.gromacs.org Gromacs] support is in the working...). It allows one to read mo...

xtcio is a library for read and write xtc file. xtc file format come from gromacs, but the gromacs library is too huge. so I pick the xtcio from gromacs as an isolated library.