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Ada-based Software Engineering:
* JGNAT is Ada support for Sun Java virtual machine and Open JDK.
* *Echosoft MonAda* (TM) is Ada support for Sun DaVinci multilanguage virtual machine.
* *Echosoft Amber* (TM) is Ada support for Enlightenment environments.
Bioinformatics:
* Ada-based *Echo...
Ada,
Amber,
Eon,
Homology,
MonAda,
DaVinci,
Java,
JGNAT,
GNAT,
Prolog,
Enlightenment,
Android,
Bioinformatics,
KnowledgeEngineering,
SoftwareEngineering
= Welcome to ACPYPI! =
A tool based on Python to use *Antechamber* to generate topologies for chemical compounds and to interface with others python applications like [http://www.ccpn.ac.uk CCPN] tools or [http://aria.pasteur.fr ARIA].
*acpypi* is pronounced as "_ace + pipe_".
Topologies fi...
Amber is a scripting language inspired by (amongst others) Eiffel and Ruby. It has a concise syntax that's easy to read and maintain.
Amber supports Contract Driven Design (CoDD) for software development, and Contract Hardening (CoHa) for robustness.
This is a really simple code to:
* read a file containing the topologies/parameters of a system (prmtop);
* read a MM simulation trajectory file in amber format;
* compute interaction energies in the trajectory.
It was originally developed to compute interaction energies between a ligand an...