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==Welcome==
*GBParsy* is a library of functions that parses the GenBank flatfile, which is a representative and popular sequence format. The library is optimized for speed and efficient use of memory so it can rapidly parse large sequence such as _Arabidopsis_ chromosome for genomic analysis. *GB...
!ParseGenBank is a minimalistic, incremental, event driven !GenBank Flat File Format parser written in C++. It aims to efficiently produce events for keywords, features, qualifiers, and coding data.
It does not attempt to parse the contents of feature or qualifier data, but provides a framework o...
scripts and tools to process and analyze bioinformatics data
1. BLAST parser
2. Sequence processor and translator
==Welcome==
*GBParsy* is a library of functions that parses the GenBank flatfile, which is a representative and popular sequence format. The library is optimized for speed and efficient use of memory so it can rapidly parse large sequence such as _Arabidopsis_ chromosome for genomic analysis. *GB...
This is stand-alone project (not related to BioPerl) that uses a Parse::RecDescent grammar to parse GenBank data. This code is available on the Comprehensive Perl Archive Network (CPAN) here:
http://search.cpan.org/dist/Bio-GenBankParser/
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==Actually the bioinformatics needs new tools that provides complete and valid information faster and easy.==
* *to extract sequences from genbank or another data sources.
* to process sequences and to fill databases.
* to represent sequences in a human readable user interface.*
* *your re...
MacVector is a propietary software that runs only on Macintosh. It works well, but if you need to read MV files on other OS/computer or, simply, you decided to shift to another solution, you may need to read MV files.
BioFace is simple software for editing and analyzing DNA, RNA, and protein sequences that is written in Java using SWT and JFace as libraries. Opening GenBank, FASTA, EMBL, or simple sequence files and analizing these sequences can be done.